EST details — SGN-E379648
| Search information |
| Request: 379648 | Match: SGN-E379648 |
| Request From: SGN database generated link | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C167925 | Clone name: TUS-1-M11 |
| ||
| Library Name: TUS | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:
Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C9383 [cLEC-5-L2] | Trace: SGN-T23877 | EST: SGN-E201042 | Direction: 5' | Facility: TIGR |
| Clone: SGN-C167925 [TUS-1-M11] | Trace: SGN-T56 | EST: SGN-E379476 | Direction: 5' | Facility: Avesthagen |
| Sequence |
| Sequence Id: SGN-E379648 | Length: 753 bp (804 bp untrimmed) |
| Status: Current Version | Direction: 3' [See links to 5' reads above] |
>SGN-E379648 [] (trimmed)
GTATTCTATCTCACTTCGGGAAGATGTTGGATTTGCTATGTCTATTTCACATAAACATTACATCAACTATAATCAATCAGCATAAATGTCTACCT
CAACGGAATGATCTAACAAAGCTATTGAATCAGACGATAATGTCGTAGAACTTTCCATGATCTGATGGACAATCGGTGGAGATTGAAGAGGCTGA
GGAGGTACTTCTAGCGCTTCAACTTCGCCTTCAAGCATTTGTACTACTTTACTCATTGAAGGGCGTAGTATCGGATTTGTTTGTATGCACCATAA
CGCAACCAAACTCAGCTTTCTAGCCATCTTCTTTTCATCATCATTTGCTTCTTCATCCACCACAATCTCTTTCCCCTTGTTGAACGTATCGTAAA
TATTATAAGGAAAATATTGGCTGGAATTCTCTTCATTTGCAACTTCATTTCTCTTCAAGTCCAACATTTCCATTAGCAGCATTCCGAAGCTGTAA
ACATCAGCTTTGTACGAGATTGCTCCAATGCTTCTGCTGATCAACTCTGGAGCAACATATCCAATCGTTCCACGAGCAGCTGTGAGAGTCACAAT
GCTCTTATCTGTTGGATATAGTTTCGCAAGCCCAAAGTCAGAAATCTTTGGAATGAAATTCTCATCCAAGAGAATGTTGTGTGGTTTGATGTCAC
AATGCAATATTCGTACATCACAGCCTCGATGCAAATACCCGATTCCTCGAGCCACTCCAAGAATAATGTCATACTTCCTCTGCCNACT
CAACGGAATGATCTAACAAAGCTATTGAATCAGACGATAATGTCGTAGAACTTTCCATGATCTGATGGACAATCGGTGGAGATTGAAGAGGCTGA
GGAGGTACTTCTAGCGCTTCAACTTCGCCTTCAAGCATTTGTACTACTTTACTCATTGAAGGGCGTAGTATCGGATTTGTTTGTATGCACCATAA
CGCAACCAAACTCAGCTTTCTAGCCATCTTCTTTTCATCATCATTTGCTTCTTCATCCACCACAATCTCTTTCCCCTTGTTGAACGTATCGTAAA
TATTATAAGGAAAATATTGGCTGGAATTCTCTTCATTTGCAACTTCATTTCTCTTCAAGTCCAACATTTCCATTAGCAGCATTCCGAAGCTGTAA
ACATCAGCTTTGTACGAGATTGCTCCAATGCTTCTGCTGATCAACTCTGGAGCAACATATCCAATCGTTCCACGAGCAGCTGTGAGAGTCACAAT
GCTCTTATCTGTTGGATATAGTTTCGCAAGCCCAAAGTCAGAAATCTTTGGAATGAAATTCTCATCCAAGAGAATGTTGTGTGGTTTGATGTCAC
AATGCAATATTCGTACATCACAGCCTCGATGCAAATACCCGATTCCTCGAGCCACTCCAAGAATAATGTCATACTTCCTCTGCCNACT
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E379648] | SGN-U575322 | Tomato 200607 | Build 2 | 7 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T530 [Download] [View] | Facility Assigned ID: 231_E11_TUS01M11.Td_082.ab1 |
| Submitter: Koni | Sequencing Facility: Avesthagen |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.964 | Expected Error Rate: 0.0072 | Quality Trim Threshold: 20.5 |
Working
