EST details — SGN-E379687

Search information 
Request: 379687Match: SGN-E379687
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C167703Clone name: TUS-1-D5
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C923 [cLEC-10-B21] Trace: SGN-T24731 EST: SGN-E201144 Direction: 5' Facility: TIGR
Clone: SGN-C167703 [TUS-1-D5] Trace: SGN-T197 EST: SGN-E378923 Direction: 3' Facility: Avesthagen
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Sequence 
Sequence Id: SGN-E379687Length: 694 bp (794 bp untrimmed)
Status: Current VersionDirection: 5' [See links to 3' reads above]
>SGN-E379687 [] (trimmed) TTTTTTCGAAATTTGCCCTTTGAGATCGATCATCAATGGAAGTTTCTATGATCTCCGATACGCTAACGGCGGTGGTAACCACTCAAGGCTTAGGT
GTTTCAAAGTTTCTGCTGAATCGCAATCTCAATTTCTCATCAAACAACGTTTTCTCAATCTCCGATTCCTCATCGGAGCAGCAATCACCTTCCAC
CGCCGGAGTTCGTCAAATTTCCGCTGTGATTTGTCCGATCGATGCCTTAGCGCCGCCTCCTGTAAAGTACAATAAGGTCAAAGCCGCACCTCGAA
GACTGGCTCGTAAGACAAGGCGGATTATACGGAAGTCGTTGATCGGTGGAGCTGATGAAGGTGATGAAAACGGATTTTTATTTGATGGAGGTAAT
TATGACGGGCCGTTTGGTGGTGGTAGTAGCTGGGGCGGTGGTGGTGGTGGTGGTAGAGGATGGAATTTTGATGGATTTGGAGGGGCAAATTGGGA
AGAATCTTCGTCGAACTCGTTTTCTGATCCGGCTTTTGATTTTGTCTATGAGTTGATGTGTTGGGCTGCGTTGTCGAATTGCTTGCATTTTGCGT
TTAAGAAAGTGGTGAGAATTGTGGCTGGTGGATTCAGTGATACAGCTAGAGAAGAAGTTGTTCCAGTTAGACTCACATCTGTCTACTGAATCAGT
AAGCTCAATTTACTGAGTAAATTCTGTTG
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E379687] SGN-U567501 Tomato 200607 Build 2 7 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T1139 [Download] [View] Facility Assigned ID: 243_D05_TUS01D5.T3_044.ab1
Submitter: Koni Sequencing Facility: Avesthagen
Funding Organization: Italian Ministry of Agriculture and Forestry (MiPAF)
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.980 Expected Error Rate: 0.0058 Quality Trim Threshold: 14.5