EST details — SGN-E379784
| Search information |
| Request: 379784 | Match: SGN-E379784 |
| Request From: SGN database generated link | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C168556 | Clone name: TUS-3-G18 |
| ||
| Library Name: TUS | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:
Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C6640 [cLEC-36-B16] | Trace: SGN-T31000 | EST: SGN-E207412 | Direction: 5' | Facility: TIGR |
| Clone: SGN-C168556 [TUS-3-G18] | Trace: SGN-T931 | EST: SGN-E379819 | Direction: 3' | Facility: Avesthagen |
| Sequence |
| Sequence Id: SGN-E379784 | Length: 704 bp (812 bp untrimmed) |
| Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E379784 [] (trimmed)
GCTTCAAAGAAATGGAAACCCACTACTCTTCCTACTTGTTCTACTTAGCTATCCTTTCGTTTTTTACTCCAATTTTATTCAGATACTTTTTCCAT
AGAAAAAGAAATCTCCCACCAAGTCCATTTTCATTTCCAATAATTGGTCATCTTTACCTTGTCAAAAATGCTCTTCATCTTACTCTAACCTCTTT
ATCAGCTAAATATGGCCCTGTTTTATACCTCAAATTAGGGTATAATATGCCTGTGATTGTTGTGTCTTCTCCATCTGCTGTCGAAGAATGTTTAA
CAAGAAACGATGTTATATTTGCAAACAGACCTAAAACATTAGCTGGTGACAAATTCACTTATAATTATATTGTTTATGTTTGGGCACCTTATGGA
CAGCTTTGGAGGATTCTTCGTCGTTTAACTGTGGTTGAGTTATTTTCATCGCAGAGCCTTTCAAAGAGTTGTACTCTTCGAGATGAAGAAATTAC
AACTTTTATCCGTTGTTTGTACAGATTTTCAACGATAAATAGTAGTAAGAAAGTAGATTTGACGAATTGGGCTTTTACTTTAGTTTTCAATCTGA
TGACTAAAATTATTGCTGGAAAACATATTGTGAAGGAAGAAGATGCTGGTATGGAGAAAGGGATCGAAATAATTGAAAAACTTAGAGGGACTTTC
TTAGTTACTATATCATTTTTGAATATGATTGATTTCTTG
AGAAAAAGAAATCTCCCACCAAGTCCATTTTCATTTCCAATAATTGGTCATCTTTACCTTGTCAAAAATGCTCTTCATCTTACTCTAACCTCTTT
ATCAGCTAAATATGGCCCTGTTTTATACCTCAAATTAGGGTATAATATGCCTGTGATTGTTGTGTCTTCTCCATCTGCTGTCGAAGAATGTTTAA
CAAGAAACGATGTTATATTTGCAAACAGACCTAAAACATTAGCTGGTGACAAATTCACTTATAATTATATTGTTTATGTTTGGGCACCTTATGGA
CAGCTTTGGAGGATTCTTCGTCGTTTAACTGTGGTTGAGTTATTTTCATCGCAGAGCCTTTCAAAGAGTTGTACTCTTCGAGATGAAGAAATTAC
AACTTTTATCCGTTGTTTGTACAGATTTTCAACGATAAATAGTAGTAAGAAAGTAGATTTGACGAATTGGGCTTTTACTTTAGTTTTCAATCTGA
TGACTAAAATTATTGCTGGAAAACATATTGTGAAGGAAGAAGATGCTGGTATGGAGAAAGGGATCGAAATAATTGAAAAACTTAGAGGGACTTTC
TTAGTTACTATATCATTTTTGAATATGATTGATTTCTTG
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E379784] | SGN-U583959 | Tomato 200607 | Build 2 | 6 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T387 [Download] [View] | Facility Assigned ID: 229_G06_TUS03G18.T3_049.ab1 |
| Submitter: Koni | Sequencing Facility: Avesthagen |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.949 | Expected Error Rate: 0.0022 | Quality Trim Threshold: 14.5 |
Working
