EST details — SGN-E379846

Search information 
Request: 379846Match: SGN-E379846
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C167977Clone name: TUS-1-O15
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C14866 [cLEC-9-G14] Trace: SGN-T25063 EST: SGN-E200769 Direction: 5' Facility: TIGR
Clone: SGN-C167977 [TUS-1-O15] Trace: SGN-T707 EST: SGN-E379276 Direction: 3' Facility: Avesthagen
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Sequence 
Sequence Id: SGN-E379846Length: 687 bp (785 bp untrimmed)
Status: Current VersionDirection: 5' [See links to 3' reads above]
>SGN-E379846 [] (trimmed) CGCACGAGTAATTTTCAAATTTAATTTCTTTTGAGTTTCTCTCTGTGTGTTAATTAATTTTCCTGCATGAATATTGGGAAGATTTTGCTAAGTAA
GAGAAGTGTATCAGGACATAATTCTTCTAATATATCGAAGAAGAGGAAAAAGAAGAAGAAGAAGATGGAACTTGAAAAGAGAAAGAGTTCAAGGG
AAGATATGGTTCAAAAGTTGTATGATACTTGCAAGCAAATATTTGCAAATGGTAAGGCTGGCTATGTCCCTCCTCCTCATGACATCCAACGACTA
AAATCCTTATTAGATAGTCTTGAACCAAAAGATTTCAAGTTTACAGCACCAAGCTTGGAATTTTCAAGCACAAATCCTCCTGGAACCGTGGAAGC
TCCTCTTGTTACCTACATTAAGATCCACGAATGCAACAAATTTTCGATTGGGATCTTCTGTTTGCCACCTTCAGGAGTAATCCCTCTTCATAATC
ATCCTGGCATGACTGTGTTCTGCAAGCTTCTAGCAGGAACCATGCACACCACGTCATATGATTGGGTGCAAAATCACAACCACCAGGCTAACCAC
GATCGCGGGCAACATGAATCTAGGATGAGGCTGGCAAAAGTACATGTTGACGATGACTTCTCTGCACCATGCAAATCTTCAGTTCTATTTCCAGA
ATCAGGAGGAAACATGCATTGC
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E379846] SGN-U571592 Tomato 200607 Build 2 10 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T146 [Download] [View] Facility Assigned ID: 225_G03_TUS01O15.T3_022.ab1
Submitter: Koni Sequencing Facility: Avesthagen
Funding Organization: Italian Ministry of Agriculture and Forestry (MiPAF)
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.970 Expected Error Rate: 0.0074 Quality Trim Threshold: 14.5