EST details — SGN-E379856

Search information 
Request: 379856Match: SGN-E379856
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C168409Clone name: TUS-3-A15
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C168409 [TUS-3-A15] Trace: SGN-T870 EST: SGN-E379574 Direction: 3' Facility: Avesthagen
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Sequence 
Sequence Id: SGN-E379856Length: 708 bp (803 bp untrimmed)
Status: Current VersionDirection: 5' [See links to 3' reads above]
>SGN-E379856 [] (trimmed) GTTTTTTGAGCAAGATGTCGAGGTTAAGAAACAGTATTACAGTAGAGATACTACGAAAAGAGTGATTCACACTAGTAATTTTGATTTGTATAGCT
CTTCTGTTCCAGCTGCAAATTGGAGAGACACACTTTTCTGTTTAATGGCTCCTGATCCTCCAAGTCCAGAAGAACTTCCAACAGCATGCGGAGAA
ATACTAATGCAATACTCTAAGGATGTGATGAAATTAGGCTTCTCCTTACTTGAATTATTATCAGAAGGTCTTGGTCTCGATCGTTGCCATCTCAA
AGATATGGATTGCGCGGAGGGGCTAGGTATTTTGGGACATTACTATCCAGCATGCCCTCAGCCAGAACTCGCGATAGGGACCAACAAACACTCTG
ACAATGATTTTATCACCGTACTTCTACAGGATCATATCGGAGGACTTCAAGTGCTTCACCAGAATCAATGGGTTAATGTTCCTCCTACACCTGGT
GCTCTTGTCGTGAACATCGGAGATCTTCTGCAGCTTATATCANATGACAAGTACATAAGTGTTGAGCACAGAGTATTGGCAAATTAAGTTGGACC
AAGAATATCAGTGGCATGCTTCTTCTACACAGGTTCAATGCCATCTTCCAAGCTTTATGGACCGATTACTGAATTGTTATCGGAAGATAATCCTC
CAAAATATCGCGCAACCACAGTGAAAGACTACCGTGACTACTT
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E379856] SGN-U579145 Tomato 200607 Build 2 7 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T326 [Download] [View] Facility Assigned ID: 229_A03_TUS03A15.T3_019.ab1
Submitter: Koni Sequencing Facility: Avesthagen
Funding Organization: Italian Ministry of Agriculture and Forestry (MiPAF)
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.984 Expected Error Rate: 0.0050 Quality Trim Threshold: 14.5