EST details — SGN-E379977
| Search information |
| Request: 379977 | Match: SGN-E379977 |
| Request From: SGN database generated link | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C167800 | Clone name: TUS-1-H6 |
| ||
| Library Name: TUS | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:
Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
No additional reads found.[Show information hierarchy]
| Sequence |
| Sequence Id: SGN-E379977 | Length: 727 bp (809 bp untrimmed) |
| Status: Current Version | Direction: 5' |
>SGN-E379977 [] (trimmed)
TTCCGCACGAGAGATGCCGCAGAGACACTCGAAGAACACAACGATCTTGCCTTCTTTACGTACGATGAGAAGAGAAAGTTAGGGTATGGAACACA
AAAGGAGAGGCTGGGAAAAGATTCAATCAAGCCATTCGATGCTTGTTCCCTTTGTTTAAAACCCTTCATCGATCCGTTGTGTTGCCAGAAAGGGC
ATGTCTTTTGCAAAGAATGCATTCTAGAATGCCTTTTGTCCCAGAAAAAGGATATCCAAAGAAAGTTAGCTGCTCATACAGGTCAGCAGAAGCAA
GAAAAAGAAGAGGAAGAGGAGAGGTTGATGCTGCAGAAAGCCAGGGATCTTGATGCATTTGATCAACAAAATCATGGTCCAGTTCCGCAGTACAA
TGATAAGAACTACAACAGAGACAAAAATGGATTCCATGGAGCTAACAGTGTGAAAGCTACTTCTTATGAGGAGGAAGCACTTAGAACCATGAAAG
CATTTTGGCTGCCCTCTGCAACACCAGATGCACCTGCTAAGGTGGAAGCCCCATCCACTAGCACAACTTGTCCTGAAGGGAGGGAAAAAATTAAG
ATGAAAAACCTTTTCCCTATACACTTCACTGAAGATACAAGTGCACAGAAGAAACACAAGTCTCTTGACAAGAGTTTCATATGTCCCAGTTGCAA
GGTCACACTAACCAATACTTTGTCACTTGTAGCACTTAATACTTGTGGACATGTCTTCTGCA
AAAGGAGAGGCTGGGAAAAGATTCAATCAAGCCATTCGATGCTTGTTCCCTTTGTTTAAAACCCTTCATCGATCCGTTGTGTTGCCAGAAAGGGC
ATGTCTTTTGCAAAGAATGCATTCTAGAATGCCTTTTGTCCCAGAAAAAGGATATCCAAAGAAAGTTAGCTGCTCATACAGGTCAGCAGAAGCAA
GAAAAAGAAGAGGAAGAGGAGAGGTTGATGCTGCAGAAAGCCAGGGATCTTGATGCATTTGATCAACAAAATCATGGTCCAGTTCCGCAGTACAA
TGATAAGAACTACAACAGAGACAAAAATGGATTCCATGGAGCTAACAGTGTGAAAGCTACTTCTTATGAGGAGGAAGCACTTAGAACCATGAAAG
CATTTTGGCTGCCCTCTGCAACACCAGATGCACCTGCTAAGGTGGAAGCCCCATCCACTAGCACAACTTGTCCTGAAGGGAGGGAAAAAATTAAG
ATGAAAAACCTTTTCCCTATACACTTCACTGAAGATACAAGTGCACAGAAGAAACACAAGTCTCTTGACAAGAGTTTCATATGTCCCAGTTGCAA
GGTCACACTAACCAATACTTTGTCACTTGTAGCACTTAATACTTGTGGACATGTCTTCTGCA
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E379977] | SGN-U568650 | Tomato 200607 | Build 2 | 24 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T650 [Download] [View] | Facility Assigned ID: 242_H05_TUS01H6.T3_046.ab1 |
| Submitter: Koni | Sequencing Facility: Avesthagen |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.966 | Expected Error Rate: 0.0043 | Quality Trim Threshold: 14.5 |
Working
