EST details — SGN-E379997
| Search information |
| Request: 379997 | Match: SGN-E379997 |
| Request From: SGN database generated link | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C167884 | Clone name: TUS-1-K18 |
| ||
| Library Name: TUS | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:
Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C9283 [cLEC-5-E5] | Trace: SGN-T23674 | EST: SGN-E200839 | Direction: 5' | Facility: TIGR |
| Clone: SGN-C167884 [TUS-1-K18] | Trace: SGN-T673 | EST: SGN-E379544 | Direction: 3' | Facility: Avesthagen |
| Sequence |
| Sequence Id: SGN-E379997 | Length: 650 bp (800 bp untrimmed) |
| Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E379997 [] (trimmed)
AATTCTTCATATTTAGTGATCACTAAAAAAAAATCAAGAAGATGTCGACTACTGTAGGCCAAGTCATTCGTTGCAAAGCTGCTGTGGCATGGGAA
GCTGGTAAGCCATTAGTGATGGAGGAAGTAGATGTTGCTCCTCCACAGAAAATGGAAGTTCGTCTTAAGATCCTCTATACTTCACTCTGTCATAC
TGATGTATACTTCTGGGAAGCTAAGGGTCAAAATCCAGTCTTTCCTCGAATTCTTGGACATGAAGCAGCAGGGATTGTGGAGAGTGTTGGAGAGG
GAGTAACAGACCTTGCACCAGGAGACCATGTTCTTCCTGTCTTTACAGGGGAATGTAAAGATTGTGCTCACTGTAAATCTGAAGAAAGCAATATG
TGTAGCCTCTTAAGGATTAACACTGACAGGGGAGTGATGCTTAATGATGGAAAATCAAGATTTTCCATCAATGGAAACCCCATTTACCATTTTGT
TGGGACCTCTACTTTTAGTGAGTACACCGTGGTTCATGTTGGATGTGTTGNCAAAATTAACCCTCTTGCTCCTCTTGACAAAGTATGTGTCCTTA
GTTGTGGAATTTCGACAGGCCTTGGAGCAAGTTTGAATGTTGCTAAACCAACAANAGGCTCAAGTGTGGCTATATTTGGA
GCTGGTAAGCCATTAGTGATGGAGGAAGTAGATGTTGCTCCTCCACAGAAAATGGAAGTTCGTCTTAAGATCCTCTATACTTCACTCTGTCATAC
TGATGTATACTTCTGGGAAGCTAAGGGTCAAAATCCAGTCTTTCCTCGAATTCTTGGACATGAAGCAGCAGGGATTGTGGAGAGTGTTGGAGAGG
GAGTAACAGACCTTGCACCAGGAGACCATGTTCTTCCTGTCTTTACAGGGGAATGTAAAGATTGTGCTCACTGTAAATCTGAAGAAAGCAATATG
TGTAGCCTCTTAAGGATTAACACTGACAGGGGAGTGATGCTTAATGATGGAAAATCAAGATTTTCCATCAATGGAAACCCCATTTACCATTTTGT
TGGGACCTCTACTTTTAGTGAGTACACCGTGGTTCATGTTGGATGTGTTGNCAAAATTAACCCTCTTGCTCCTCTTGACAAAGTATGTGTCCTTA
GTTGTGGAATTTCGACAGGCCTTGGAGCAAGTTTGAATGTTGCTAAACCAACAANAGGCTCAAGTGTGGCTATATTTGGA
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E379997] | SGN-U579420 | Tomato 200607 | Build 2 | 345 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T112 [Download] [View] | Facility Assigned ID: 225_C06_TUS01K18.T3_040.ab1 |
| Submitter: Koni | Sequencing Facility: Avesthagen |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.986 | Expected Error Rate: 0.0147 | Quality Trim Threshold: 14.5 |
Working
