EST details — SGN-E380065

Search information 
Request: 380065Match: SGN-E380065
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C168631Clone name: TUS-3-J21
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C7544 [cLEC-39-F22] Trace: SGN-T31860 EST: SGN-E208570 Direction: 5' Facility: TIGR
Clone: SGN-C168631 [TUS-3-J21] Trace: SGN-T736 EST: SGN-E379400 Direction: 5' Facility: Avesthagen
[Show information hierarchy]
Sequence 
Sequence Id: SGN-E380065Length: 700 bp (794 bp untrimmed)
Status: Current VersionDirection: 3' [See links to 5' reads above]
>SGN-E380065 [] (trimmed) ACTTGTTGATGCATTATTCAGTGTTCTCTGTCTGCGTACAGCATGTAGTTAGTTCATTCCGAGCAGTAGGTGGGATGAACCCACTGCGTACATAC
TACATGCAGATCGAGTAATGTTTCCAAATAGAGTATAGTTAACAGGAATATACAACTTTTTATTGTAAACAATCTGCAAAGAATATTTCTGGTTG
CATTACATGAAATTTATGGCAGTAATGCACCCAGCTGTTGATACAAATTCACCTCTTAACTCGAAACAGAATATGTTCTCCTTTTCCCCAGAAAA
AGATCCATTTTAATGTTGACTATCATGAAGCTGTTAAGAATTCGCAGCGTAAAGAACACACTGGTCAATTAAAATGCAGAATTAGCTCCCTTGGT
TTTCCCTAACAACACGTCCTTGGCTTCATTGATCTTGGAAGCAAGATAATGGCTGCCACCGGCGTCTGGATGATTTGCTACCATTACTCTCCTGT
GAGCCTCCTTGATCTTCTGCAAGACAGCACTTTCCCTAACTCCGAGAATCAATGCTGCTTCTCGCCGTGTCATATCCCGATCAAAGCCCCCAGGA
TAAAACCTCCTCACTCGGGGTGCTGCTTTGAACCTTTGCCACGCTCTTATCAAGTATCTAGCTCCCAAAGCAGCAGCACCAATGGTAGTTCCAAC
AACTAATGGAGTTGACATGAGAAAACTCGCAAGTC
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E380065] SGN-U573193 Tomato 200607 Build 2 4 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T1046 [Download] [View] Facility Assigned ID: 241_B09_TUS03J21.Td_073.ab1
Submitter: Koni Sequencing Facility: Avesthagen
Funding Organization: Italian Ministry of Agriculture and Forestry (MiPAF)
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: No vector sequence detected
Passed all screens and filters
Sequence Entropy: 0.979 Expected Error Rate: 0.0017 Quality Trim Threshold: 20.5