EST details — SGN-E380076
| Search information |
| Request: 380076 | Match: SGN-E380076 |
| Request From: SGN database generated link | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C167784 | Clone name: TUS-1-G14 |
| ||
| Library Name: TUS | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:
Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C8257 [cLEC-4-O2] | Trace: SGN-T24319 | EST: SGN-E201369 | Direction: 5' | Facility: TIGR |
| Clone: SGN-C167784 [TUS-1-G14] | Trace: SGN-T461 | EST: SGN-E378844 | Direction: 3' | Facility: Avesthagen |
| Sequence |
| Sequence Id: SGN-E380076 | Length: 639 bp (798 bp untrimmed) |
| Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E380076 [] (trimmed)
CAGACTTCTCGAACTTACTGGAACCATTAGAAAAGGACATGGTCAGCCTCAGTACTTAGATAAATTGCAGGTAGAGAGGGAACGGGGAATAACCG
TTAAAGCCCAAACAGCAACTATGTTCCATCGTCACAAGTTCCTTGGCAGTGACACAGATTTTTTGTTAAACCTTATTGACACACCTGGGCATGTG
GATTTCAGCTATGAAGTATCCAGATCTTTGGCAGCTTGTCAAGGTGCCCTTTTGGTTGTAGATGCAGCCCAAGGTGTGCAGGCACAGACTGTTGC
TAATTTTTACCTCGCGTTTGAATCAAACCTGGCCATAATTCCTGTCATAAATAAAATTGATCAGCCCACTGCTGATCCAGATCGGGTAAAAACAC
AGCTCAAATCTATGTTTGACCTTAATCCAAGCGATGTACTATTGACATCAGCAAAAACGGGTCTAGGTCTAGAGCATGTTCTTCCTGCTGCAATA
GAGAGAATTCCTCCACCCCCTGGTAAAAACACTTCACCTTTGCGAATGCTTTTGCTGGATTCATATTATGATGAGTACAAAGGAGTTATCTGCCA
TGTGGCTATTGTTGATGGTGCTCTGCACNAGGGTGACAAGATTTGCTCTGCTGCGACTGGGCCAAGTTA
TTAAAGCCCAAACAGCAACTATGTTCCATCGTCACAAGTTCCTTGGCAGTGACACAGATTTTTTGTTAAACCTTATTGACACACCTGGGCATGTG
GATTTCAGCTATGAAGTATCCAGATCTTTGGCAGCTTGTCAAGGTGCCCTTTTGGTTGTAGATGCAGCCCAAGGTGTGCAGGCACAGACTGTTGC
TAATTTTTACCTCGCGTTTGAATCAAACCTGGCCATAATTCCTGTCATAAATAAAATTGATCAGCCCACTGCTGATCCAGATCGGGTAAAAACAC
AGCTCAAATCTATGTTTGACCTTAATCCAAGCGATGTACTATTGACATCAGCAAAAACGGGTCTAGGTCTAGAGCATGTTCTTCCTGCTGCAATA
GAGAGAATTCCTCCACCCCCTGGTAAAAACACTTCACCTTTGCGAATGCTTTTGCTGGATTCATATTATGATGAGTACAAAGGAGTTATCTGCCA
TGTGGCTATTGTTGATGGTGCTCTGCACNAGGGTGACAAGATTTGCTCTGCTGCGACTGGGCCAAGTTA
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E380076] | SGN-U586459 | Tomato 200607 | Build 2 | 18 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T1239 [Download] [View] | Facility Assigned ID: 244_G02_TUS01G14.T3_018.ab1 |
| Submitter: Koni | Sequencing Facility: Avesthagen |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.989 | Expected Error Rate: 0.0100 | Quality Trim Threshold: 14.5 |
Working
