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EST details — SGN-E380076

Search information 
Request: 380076Match: SGN-E380076
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C167784Clone name: TUS-1-G14
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C8257 [cLEC-4-O2] Trace: SGN-T24319 EST: SGN-E201369 Direction: 5' Facility: TIGR
Clone: SGN-C167784 [TUS-1-G14] Trace: SGN-T461 EST: SGN-E378844 Direction: 3' Facility: Avesthagen
[Show information hierarchy]
Sequence 
Sequence Id: SGN-E380076Length: 639 bp (798 bp untrimmed)
Status: Current VersionDirection: 5' [See links to 3' reads above]
>SGN-E380076 [] (trimmed) CAGACTTCTCGAACTTACTGGAACCATTAGAAAAGGACATGGTCAGCCTCAGTACTTAGATAAATTGCAGGTAGAGAGGGAACGGGGAATAACCG
TTAAAGCCCAAACAGCAACTATGTTCCATCGTCACAAGTTCCTTGGCAGTGACACAGATTTTTTGTTAAACCTTATTGACACACCTGGGCATGTG
GATTTCAGCTATGAAGTATCCAGATCTTTGGCAGCTTGTCAAGGTGCCCTTTTGGTTGTAGATGCAGCCCAAGGTGTGCAGGCACAGACTGTTGC
TAATTTTTACCTCGCGTTTGAATCAAACCTGGCCATAATTCCTGTCATAAATAAAATTGATCAGCCCACTGCTGATCCAGATCGGGTAAAAACAC
AGCTCAAATCTATGTTTGACCTTAATCCAAGCGATGTACTATTGACATCAGCAAAAACGGGTCTAGGTCTAGAGCATGTTCTTCCTGCTGCAATA
GAGAGAATTCCTCCACCCCCTGGTAAAAACACTTCACCTTTGCGAATGCTTTTGCTGGATTCATATTATGATGAGTACAAAGGAGTTATCTGCCA
TGTGGCTATTGTTGATGGTGCTCTGCACNAGGGTGACAAGATTTGCTCTGCTGCGACTGGGCCAAGTTA
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E380076] SGN-U586459 Tomato 200607 Build 2 18 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T1239 [Download] [View] Facility Assigned ID: 244_G02_TUS01G14.T3_018.ab1
Submitter: Koni Sequencing Facility: Avesthagen
Funding Organization: Italian Ministry of Agriculture and Forestry (MiPAF)
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.989 Expected Error Rate: 0.0100 Quality Trim Threshold: 14.5