EST details — SGN-E389539

Search information 
Request: 389539Match: SGN-E389539
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C168916Clone name: TUS-4-F18
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C168916 [TUS-4-F18] Trace: SGN-T191124 EST: SGN-E389798 Direction: 5' Facility: Avesthagen
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Sequence 
Sequence Id: SGN-E389539Length: 752 bp (803 bp untrimmed)
Status: Current VersionDirection: 3' [See links to 5' reads above]
>SGN-E389539 [] (trimmed) ATATGTGGTTAACTTGATATGAACTATATACCAAACCAATAATTTCTATTAATAATTGATCTAACCAATTACAAAAAATAGTAACTAATAATGAA
AAAGTCAAAATAAACAAAACTTGTCCAAATTCTCCTAATTCTTTGGCTGCACTTCATTTCCCAGTACATTCTACCGAAAGGTCGATTGTCGAAAT
TTCAACAAATTCTTTTTTATTAAAATGCACATTCTAGAGAGTCTCTTCATTGATCTGGTGATCGATTATTAAATAGTACATTCTATTGAAAGGTC
GATTGTCAAAATTTCAACAAATTTTCTTTTATTAAAATGCATATTCTGGAGAGTCTCTTCATTGGTCTGGTGATTAATTAATCATCCAAGAGCGC
AACCATCATGTTTAATGAATTGATGGAATTTAGTATAAATATTATAGTGACGGGTGAATAACTTCTTTTTTTTTTTCAATAAAGATTCAGATAAA
ATCAAACTTGTCTGGAAGGGTTCGATTTCATTTTTTTTTTCATGTAAACCTTCTTGTCTCAAGGAAACTTTTATTAGGGGAATCACAAGATTTTA
AGTATTCAAGAAATGCAGCAAAATTTGTGTCTTTGTAAAGACTTGGATTTGTTTCACTAATTAATTTAGGTGATGGCTTTATTATGCTATTGAAT
GGAAGACTATGCAAAGAAGCCACTGAAATTCTTGACTTTAAAGATTCACAAGAACTCTATGTAACACACTTTTGTATTTTCCATTGC
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E389539] SGN-U576069 Tomato 200607 Build 2 17 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T190865 [Download] [View] Facility Assigned ID: TUS04-F18.Td
Submitter: Koni Sequencing Facility: Avesthagen
Funding Organization: Italian Ministry of Agriculture and Forestry (MiPAF)
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: No vector sequence detected
Passed all screens and filters
Sequence Entropy: 0.914 Expected Error Rate: 0.0020 Quality Trim Threshold: 20.5