EST details — SGN-E389540

Search information 
Request: 389540Match: SGN-E389540
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C168899Clone name: TUS-4-F1
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C168899 [TUS-4-F1] Trace: SGN-T191126 EST: SGN-E389800 Direction: 5' Facility: Avesthagen
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Sequence 
Sequence Id: SGN-E389540Length: 367 bp (777 bp untrimmed)
Status: Current VersionDirection: 3' [See links to 5' reads above]
>SGN-E389540 [] (trimmed) TAGTTTCTCTAACACCTCCATTGAATTCTTGTTATACATAAACAAACCACAATACAAATCAAAACTATCACTAGTTGTATTCTCTTTCCAATTCA
ACAAACTTTCATATCCTTTTGTGTTTATAGGAGTTGTTTGTGTCCCAAGTCTTTGTAACATTCTTCCAATAGTATGTGTAATAAATTGTGATCCA
GCAGCATACTTGTCATGTTCACTACAACTCATTTCAACCATTCTACAACCTTCTTTTACAAAAATGTTGATAAAATTGTTGACTCTTTTAATTCT
TGACTCTTCTTGTCCAATTCTAACTTTGTCATACATAAATGGTAGTCCTTTCCAATTGTCTTTACCACTTGTTGGACCAAAC
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E389540] SGN-U570951 Tomato 200607 Build 2 20 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T190866 [Download] [View] Facility Assigned ID: TUS04-F1.Td
Submitter: Koni Sequencing Facility: Avesthagen
Funding Organization: Italian Ministry of Agriculture and Forestry (MiPAF)
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.893 Expected Error Rate: 0.0067 Quality Trim Threshold: 14.5