EST details — SGN-E389558
| Search information |
| Request: 389558 | Match: SGN-E389558 |
| Request From: SGN database generated link | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C168923 | Clone name: TUS-4-G1 |
| ||
| Library Name: TUS | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:
Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C168923 [TUS-4-G1] | Trace: SGN-T191341 | EST: SGN-E390015 | Direction: 5' | Facility: Avesthagen |
| Sequence |
| Sequence Id: SGN-E389558 | Length: 632 bp (792 bp untrimmed) |
| Status: Current Version | Direction: 3' [See links to 5' reads above] |
>SGN-E389558 [] (trimmed)
TGAATAATGTTTGACAGGAATCTGAGGCAGGAAAACTTATAACAGTGAAACAATTGAGCATATAGAACAGTAAGTAATCACTAATTGCCGTAACA
AAGAAATATCAATGTGTAACAGAAGAAGACCCTATTTCAGTCATTGGTGGTGTGAGGTTTGGTGTAGAAGCTTCCGTGGATGGTCGAGTCCCCGT
ATTCACTCTCCTAACACCCTCTACCATCTTTACTACTTCTGTCATTTTTGGTCTCTGCTCTGGCATTCTGGATACACAAGTCAAACCTATTTGTA
ACATCTCCACCATTTCTTCTTCTATATTTGGATACCTCAAAAGCTCCACGTCGAATACTTCAGCAGTCCACTCCTCACGAACGACAGAATGTACC
CACCTGACTAAGTGGACAATGTCGCTAGTACCTGTGGCATGTGTAGGGGACTTTCCAGTGAGAAGTTCAAGTATTAGGACGCCAAAGCTGTAGAC
ATCAGTGGCTTGAGATACTTTTCTTGAATCTGTAACTTCTGGAGGTTGATAACCAGCAGCTCGCACGATTGGTATAGCAATTGGACCCATTATAG
TTGCCCAGCCAAGATCCGAAATACAACCGAAACCTTGGGAGTTGAGGAATATGTTTGAAGGA
AAGAAATATCAATGTGTAACAGAAGAAGACCCTATTTCAGTCATTGGTGGTGTGAGGTTTGGTGTAGAAGCTTCCGTGGATGGTCGAGTCCCCGT
ATTCACTCTCCTAACACCCTCTACCATCTTTACTACTTCTGTCATTTTTGGTCTCTGCTCTGGCATTCTGGATACACAAGTCAAACCTATTTGTA
ACATCTCCACCATTTCTTCTTCTATATTTGGATACCTCAAAAGCTCCACGTCGAATACTTCAGCAGTCCACTCCTCACGAACGACAGAATGTACC
CACCTGACTAAGTGGACAATGTCGCTAGTACCTGTGGCATGTGTAGGGGACTTTCCAGTGAGAAGTTCAAGTATTAGGACGCCAAAGCTGTAGAC
ATCAGTGGCTTGAGATACTTTTCTTGAATCTGTAACTTCTGGAGGTTGATAACCAGCAGCTCGCACGATTGGTATAGCAATTGGACCCATTATAG
TTGCCCAGCCAAGATCCGAAATACAACCGAAACCTTGGGAGTTGAGGAATATGTTTGAAGGA
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E389558] | SGN-U582034 | Tomato 200607 | Build 2 | 5 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T190884 [Download] [View] | Facility Assigned ID: TUS04-G1.Td |
| Submitter: Koni | Sequencing Facility: Avesthagen |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.976 | Expected Error Rate: 0.0044 | Quality Trim Threshold: 20.5 |
Working
