EST details — SGN-E389599
| Search information |
| Request: 389599 | Match: SGN-E389599 |
| Request From: SGN database generated link | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C169005 | Clone name: TUS-4-J11 |
| ||
| Library Name: TUS | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:
Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C24549 [cLED-8-M10] | Trace: SGN-T50816 | EST: SGN-E232883 | Direction: 5' | Facility: TIGR |
| Clone: SGN-C169005 [TUS-4-J11] | Trace: SGN-T191181 | EST: SGN-E389855 | Direction: 5' | Facility: Avesthagen |
| Sequence |
| Sequence Id: SGN-E389599 | Length: 712 bp (798 bp untrimmed) |
| Status: Current Version | Direction: 3' [See links to 5' reads above] |
>SGN-E389599 [] (trimmed)
AATCGTGGATTTGGAGTTAGCAATCCCAAAATCTAAACACTACCACACCTTTTCAACCCTAAACCACAAGAATTTGATCTCCCAAAAGAGTCCAA
TGTCTTTGCAACATCACTAGCACAAGGCCTTGCTGCTGGCTCACTAGCAGTACATTGAAGAGCCACATTCATCATCTCCACCATTTTATTCTGAT
TATTCACTGCGTCACTCTTCAATAATGGTTCAATCCATGTCTCCAAATGACATTCTGAGTAGCAATATCGCGCCCAATCAACTATACTCTCACGT
TTCCCAAATTCAGCATCACCGCTATTTTTTCCAGTCAATAACTCTATCAAAACAAGCCCAAATCCATATATATCACTCTTCTCCGATATTCCATT
GTATTCTGGAGCAACGTACGCGGTAGTGGTGGGAAGACTCAATCTCAGACGAGGCTCATCTTTTCCGTCAATGATAACTTTCCGGGAAGAAAGTT
CACCGATGAAAATGGTTGGAGAACAAGAAGAATGCAAATATTTCAATGCTCTAGCTATGCCAATAGCAACTTTTTGTCTACGTTCCCAACTCATC
ACTCCAATCACTTCACTCAAATCTTTACCTTCTACATACTCATAAACCAAAATACCGCCTCTCTCCGATTTGCATGCAGCCTATATCTTCACAAT
ATTTGGATGTCGAATATCTCCTATTTCGTGGATGTGTGTCCAAAAAC
TGTCTTTGCAACATCACTAGCACAAGGCCTTGCTGCTGGCTCACTAGCAGTACATTGAAGAGCCACATTCATCATCTCCACCATTTTATTCTGAT
TATTCACTGCGTCACTCTTCAATAATGGTTCAATCCATGTCTCCAAATGACATTCTGAGTAGCAATATCGCGCCCAATCAACTATACTCTCACGT
TTCCCAAATTCAGCATCACCGCTATTTTTTCCAGTCAATAACTCTATCAAAACAAGCCCAAATCCATATATATCACTCTTCTCCGATATTCCATT
GTATTCTGGAGCAACGTACGCGGTAGTGGTGGGAAGACTCAATCTCAGACGAGGCTCATCTTTTCCGTCAATGATAACTTTCCGGGAAGAAAGTT
CACCGATGAAAATGGTTGGAGAACAAGAAGAATGCAAATATTTCAATGCTCTAGCTATGCCAATAGCAACTTTTTGTCTACGTTCCCAACTCATC
ACTCCAATCACTTCACTCAAATCTTTACCTTCTACATACTCATAAACCAAAATACCGCCTCTCTCCGATTTGCATGCAGCCTATATCTTCACAAT
ATTTGGATGTCGAATATCTCCTATTTCGTGGATGTGTGTCCAAAAAC
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E389599] | SGN-U571187 | Tomato 200607 | Build 2 | 3 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T190925 [Download] [View] | Facility Assigned ID: TUS04-J11.Td |
| Submitter: Koni | Sequencing Facility: Avesthagen |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.951 | Expected Error Rate: 0.0090 | Quality Trim Threshold: 20.5 |
Working
