EST details — SGN-E389604

Search information 
Request: 389604Match: SGN-E389604
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C169011Clone name: TUS-4-J17
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C24591 [cLED-8-O8] Trace: SGN-T50707 EST: SGN-E232774 Direction: 5' Facility: TIGR
Clone: SGN-C169011 [TUS-4-J17] Trace: SGN-T191186 EST: SGN-E389860 Direction: 5' Facility: Avesthagen
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Sequence 
Sequence Id: SGN-E389604Length: 566 bp (790 bp untrimmed)
Status: Current VersionDirection: 3' [See links to 5' reads above]
>SGN-E389604 [] (trimmed) TAGAGAGCATACGAAAAACGATTACTTAAGATATGACACAAGCAATATGAATACGTGGAATGATTGCCACTTAGCGACAAGTTCTATGTATCAAA
GAGGAGACTATTACAGGAAATTATGTACTTGTTTGGAGTTACAGATCTTGTTATCTTCCACCAGACAGTTCAACTGCATCTTGATTATAGATTGA
ATCTTCGCCCCAATCAAATCGTCGTTGTAGTCTCTCGTATTCTTGCCTACGTGTAACTTCGACATGCTGCCATTCTTCCCACCGCTCAGCAAGTC
CCTCTCCTTCAAGCATTCGTACTACCTCTGACATTGCTGGACGGTCCTCTGGTGATCCTTGAGTACACAGCAATGCAACTTGAATCATCATCTCT
ACTTCATCCATGTTATAGTTCTTATGTAGGTTGCGGTCGACAATAGCATCCAGCCTTTTCTCCCTTTGCAGTTTTTTAACATGGTCAAGTAACAA
GACATCATCTTCTTCTTCTAGGCGTGAAAAGTCTATAGCGCGTTGACCAGTTACAATCTCCAAAAGCATGATCCCATATCCAAAAACATCA
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E389604] SGN-U584982 Tomato 200607 Build 2 6 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T190930 [Download] [View] Facility Assigned ID: TUS04-J17.Td
Submitter: Koni Sequencing Facility: Avesthagen
Funding Organization: Italian Ministry of Agriculture and Forestry (MiPAF)
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 3' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.978 Expected Error Rate: 0.0064 Quality Trim Threshold: 14.5