Notice: Due to a regional power outage, SGN was briefly unavailable on Saturday, Feb 4. We apologize for the inconvenience.

EST details — SGN-E389795

Search information 
Request: 389795Match: SGN-E389795
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C168912Clone name: TUS-4-F14
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C168912 [TUS-4-F14] Trace: SGN-T190861 EST: SGN-E389535 Direction: 3' Facility: Avesthagen
[Show information hierarchy]
Sequence 
Sequence Id: SGN-E389795Length: 709 bp (775 bp untrimmed)
Status: Current VersionDirection: 5' [See links to 3' reads above]
>SGN-E389795 [] (trimmed) CATTCTAGTGCCTACAACGCCAGGAAGCCTTTATTACTATACCTATCGGTCACTGAAACCACTATGGGGTCTATGTTGGCTTAATACGATGAAGA
CAGACGGAAGTAAAGGGCCATATACTACCAACGTAAGAAAATGACTGACTACAAGACCAGGTATACCAATTTTGAGAAAACCTGCTTGGCGGGTA
AGGCGGAAATTGAGGCATTACATGCTGTCTTACCCAGTACATTTAATAGCTTCCATGGACCTACAAAAAAAGTATTTGTTCGAGAAACCCGCCTT
AACGTAACGGGAAGGACCGCAAGATGGTTACTGCTTCTGTCTGAATTCGACATCACGTATGTAACCAAAAAGGAAGGGCGATAGCAGAACACCTT
GCACCCTATCAAGGAGGAACATGAGTTTAAGGATTGCTTCCCAGACGAGGAAATAGCTGTCACAGAAGAGGAGCTGAAAGCCACTTGACTGTAAG
GAGAGGAGGGCATGGAAATTTGACTTTGATGGCACGACTAATCAAAATGGGTACGGAGTAGGGGCATTGCTGATTGCACCTGATGAATCGCACAC
CCCCATTGCCATTAAGCGGAACTTTTAAGGAACTAAGAATACCACTGAAGATGAAGCATGTATCCATGGATTAAAGACTGCCTTGACCCTGGGAA
TATAAGAAATCGAAGTATTTAGGGATTCGACGCTTATCATCTGC
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E389795] SGN-U577132 Tomato 200607 Build 2 2 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T191121 [Download] [View] Facility Assigned ID: TUS04-F14.T3
Submitter: Koni Sequencing Facility: Avesthagen
Funding Organization: Italian Ministry of Agriculture and Forestry (MiPAF)
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.978 Expected Error Rate: 0.0026 Quality Trim Threshold: 14.5