EST details — SGN-E389836
| Search information |
| Request: 389836 | Match: SGN-E389836 |
| Request From: SGN database generated link | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C168950 | Clone name: TUS-4-H4 |
| ||
| Library Name: TUS | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:
Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C168950 [TUS-4-H4] | Trace: SGN-T190906 | EST: SGN-E389580 | Direction: 3' | Facility: Avesthagen |
| Sequence |
| Sequence Id: SGN-E389836 | Length: 712 bp (784 bp untrimmed) |
| Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E389836 [] (trimmed)
CAGGCAAGGTCTTTTAAAGTTGGAAGAATAGTCCATGCGAGAAAATTCTTTGCTGAGATGCTATCTGCAGGGTTCATACCTGATTTTTACACTCA
TGGCATTGTGATCAATGGTTATTTTAAGAATGGACTTGTTGAAGAGGCTTTGTCGCTCTTTAATAAGTTGGAAGGAAACAGAGAAATTAATGATA
TTGAATTTTACAATGTTGTCATCAATGGATTGTGCAAAACTGGTAAACTCGATGAAGCTCGTGCTATTTTTGAGAAGCTTTATTTAATTGGATTG
CTTCCGAATGCGAGAACATACAATAAGATCACTAATGGATTTTGTCTTGAAGGGTTGTTAGATGAAGCTAATGATATGCTTAGAAAAATGGAGGA
GAATGGTATTTTGCCAAACTTCTTCACTTACAATGCCCTTGTGCGGGGATTTCTCAGGTGTAGCAAAATTACTGAAATGACAACTTTTATGAAGG
AAATGACGGGTAGGGGGTTCTCATTTGATGCAACTACAACGGAGTTATTGTTAGAAGTTCTAAGGGAGAGTCCGTCCGTCCTTGACATGATACTA
GATCTTCACTCAAAAATTATGAAGTGAATATTCTTTGACCTGATTTATTCGGCTACACTATCATTGTGATACAATTTCCTTTTAGCNACTGCAAA
GAAATGCTTTCTAATGCAGTCGTGGAAGCAGAAAAGCTAATTAGAAC
TGGCATTGTGATCAATGGTTATTTTAAGAATGGACTTGTTGAAGAGGCTTTGTCGCTCTTTAATAAGTTGGAAGGAAACAGAGAAATTAATGATA
TTGAATTTTACAATGTTGTCATCAATGGATTGTGCAAAACTGGTAAACTCGATGAAGCTCGTGCTATTTTTGAGAAGCTTTATTTAATTGGATTG
CTTCCGAATGCGAGAACATACAATAAGATCACTAATGGATTTTGTCTTGAAGGGTTGTTAGATGAAGCTAATGATATGCTTAGAAAAATGGAGGA
GAATGGTATTTTGCCAAACTTCTTCACTTACAATGCCCTTGTGCGGGGATTTCTCAGGTGTAGCAAAATTACTGAAATGACAACTTTTATGAAGG
AAATGACGGGTAGGGGGTTCTCATTTGATGCAACTACAACGGAGTTATTGTTAGAAGTTCTAAGGGAGAGTCCGTCCGTCCTTGACATGATACTA
GATCTTCACTCAAAAATTATGAAGTGAATATTCTTTGACCTGATTTATTCGGCTACACTATCATTGTGATACAATTTCCTTTTAGCNACTGCAAA
GAAATGCTTTCTAATGCAGTCGTGGAAGCAGAAAAGCTAATTAGAAC
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E389836] | SGN-U569224 | Tomato 200607 | Build 2 | 4 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T191162 [Download] [View] | Facility Assigned ID: TUS04-H4.T3 |
| Submitter: Koni | Sequencing Facility: Avesthagen |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.958 | Expected Error Rate: 0.0062 | Quality Trim Threshold: 14.5 |
Working
