EST details — SGN-E389867
| Search information |
| Request: 389867 | Match: SGN-E389867 |
| Request From: SGN database generated link | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C168999 | Clone name: TUS-4-J5 |
| ||
| Library Name: TUS | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:
Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C24531 [cLED-8-K22] | Trace: SGN-T50701 | EST: SGN-E232768 | Direction: 5' | Facility: TIGR |
| Clone: SGN-C168999 [TUS-4-J5] | Trace: SGN-T190936 | EST: SGN-E389610 | Direction: 3' | Facility: Avesthagen |
| Sequence |
| Sequence Id: SGN-E389867 | Length: 503 bp (800 bp untrimmed) |
| Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E389867 [] (trimmed)
CGGGCTGCAGGGGGTGCTCTGTTGCTGGAGATTCTCACCGGGAAAGAAGTTTCCGCTTTATATGAAGGTTCTACACCAACTTGGCTGAATTGTTG
ATCCCGGTGCTTAATGATGATAATGCAAAGGAGAGTTTGAGCAACTTCGTTGACCCTTCTCTGCAAGGGAAGTACCCTGTGGAACTTGCTTTTGC
CATGGTCAGATTGATCGATAACTGCCTAATGAAAGATCCCTCACATCGCCCTAATACGGATGAGATTGTGCAATCTGTTTCAAGAATTATGACAG
CCACACACTCATGGGAAACTTCATTTAGCACTTCAGTGTCACCACATAGATTGCCCTAGATCAATGATTGTTTTTCTTTGTTGTTTATTTTGTTT
TTGTTTTTTCCTCCTTCCACATCTAGCATGATTTGTTATGTGCAATTGTTATTACCTTGTTTATGAATTTGGAAGAGCTATTGCACCATTTATCC
TACATAAAAATCAGTTTAACATTTCAGT
ATCCCGGTGCTTAATGATGATAATGCAAAGGAGAGTTTGAGCAACTTCGTTGACCCTTCTCTGCAAGGGAAGTACCCTGTGGAACTTGCTTTTGC
CATGGTCAGATTGATCGATAACTGCCTAATGAAAGATCCCTCACATCGCCCTAATACGGATGAGATTGTGCAATCTGTTTCAAGAATTATGACAG
CCACACACTCATGGGAAACTTCATTTAGCACTTCAGTGTCACCACATAGATTGCCCTAGATCAATGATTGTTTTTCTTTGTTGTTTATTTTGTTT
TTGTTTTTTCCTCCTTCCACATCTAGCATGATTTGTTATGTGCAATTGTTATTACCTTGTTTATGAATTTGGAAGAGCTATTGCACCATTTATCC
TACATAAAAATCAGTTTAACATTTCAGT
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E389867] | SGN-U564297 | Tomato 200607 | Build 2 | 60 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T191193 [Download] [View] | Facility Assigned ID: TUS04-J5.T3 |
| Submitter: Koni | Sequencing Facility: Avesthagen |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.963 | Expected Error Rate: 0.0162 | Quality Trim Threshold: 20.5 |
Working
