EST details — SGN-E389940

Search information 
Request: 389940Match: SGN-E389940
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C169127Clone name: TUS-4-O13
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C22826 [cLED-3-J22] Trace: SGN-T49053 EST: SGN-E228405 Direction: 5' Facility: TIGR
Clone: SGN-C169127 [TUS-4-O13] Trace: SGN-T191007 EST: SGN-E389681 Direction: 3' Facility: Avesthagen
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Sequence 
Sequence Id: SGN-E389940Length: 604 bp (790 bp untrimmed)
Status: Current VersionDirection: 5' [See links to 3' reads above]
>SGN-E389940 [] (trimmed) TTACCGTGGATCCGAGGGCTGCAGGAATTCTGCACCAGCAACGCCAATCCTCCTTCCATGGCTTTGACAATTCATCTTCTTTATCCAAATCGTTT
CCCTTCACAATTCACAAACTCCCAAACCAATTTGGTCCCTTCGATGTATACCTTCAAGAATCATCCCAAGTTTCACAAAGTCTCGTGCACCAACA
ACGACGACGACATGAACGATATTGACCTGGCATCAGATTTTGCAACAGAGGTTGGAAAGATGAACACCCAGATGATACAGAAAGAGGAAGCGTTG
AAGAAAAGCAAAGAGCTTTTGTTCGTTGAGTTTTGCCACTACACGGGATTGAAATCGGAGGAAATGAAGAAGAAATGGAAGAAGTTCAGTGAGGA
GGAACAATGGGATTTGGTTAAAAGTTTTGTTTTAGAATGGGGTGCCCATTTTCATCCATTATCTGCGAGGTCTGTTAAAGAATTAGTCGATGAGT
ACTTAGTTGAAAACATTTCTGAGTTCAATTCTTCTACTTCTTCTTCTTCTTCTTCTTTTTTCCCTGGTCTCAAAAAAATTGATGGGATTTTCAGG
GGATGATAATGAATAAATTGGATTTTCAGTTAAA
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E389940] SGN-U581176 Tomato 200607 Build 2 12 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T191266 [Download] [View] Facility Assigned ID: TUS04-O13.T3
Submitter: Koni Sequencing Facility: Avesthagen
Funding Organization: Italian Ministry of Agriculture and Forestry (MiPAF)
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.954 Expected Error Rate: 0.0013 Quality Trim Threshold: 14.5