EST details — SGN-E389948

Search information 
Request: 389948Match: SGN-E389948
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C169116Clone name: TUS-4-O2
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C169116 [TUS-4-O2] Trace: SGN-T191015 EST: SGN-E389689 Direction: 3' Facility: Avesthagen
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Sequence 
Sequence Id: SGN-E389948Length: 691 bp (796 bp untrimmed)
Status: Current VersionDirection: 5' [See links to 3' reads above]
>SGN-E389948 [] (trimmed) TCCACGAGACACATTGAGCTATCATACTGTTGTTTTGAGTCCTTCAAGGTGCTTGCTAATCATTATCTAGACGTTACGTCTCATGATGATTACTT
TCCTGAGATTCATCGTTTATTAGGGGAAACTAATATAACTCCAGCTGATGTTGCTGAGAGTTTGATGCCCAAGTCTTCTAAGGAAAATGCAGATA
CTTGCTTGGAGAGGTTAGTTAAAGCTATTGAAACAGCAAAGGTGGAAGCAAAATTGAAGGCTGAGGAAGAAAAGGCAGAGAAGGAGAAGGAAGAG
AACGAGAACGAAAAGAAAAAGAAAGAAGCAGCAGCTGCTGCAGAAGACGCGAAAAGGGCTGATGATGTGAACGAAAATGGGACGTCGATGGAGAC
TAAGGAAAAGCCAGAAAGTGATGGTGCTAAGGAAAATTGCAAGTCTGAGATAGTAATGGACTAATGATGATGTTAGTAAAGGGTTAGTAAAGTTT
GATCATGGAAATATTTGATCAATTAGGTGTTGCCCATAGAACCAGGATTCAGATATTTTGAATAATTTTGTTGTTGAACATTGTTGATTTTGTTA
TTCAAGAGATACTATGATGATGTAAGAAGTGGTTGTTGCATAATACATAGTGTAGTATCTTATCTTTTTGTGGTAACAAATATTTACATCTTAGT
AACTTGGTGATATATATCAATTTCCT
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E389948] SGN-U571250 Tomato 200607 Build 2 4 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T191274 [Download] [View] Facility Assigned ID: TUS04-O2.T3
Submitter: Koni Sequencing Facility: Avesthagen
Funding Organization: Italian Ministry of Agriculture and Forestry (MiPAF)
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.947 Expected Error Rate: 0.0095 Quality Trim Threshold: 14.5