EST details — SGN-E389953

Search information 
Request: 389953Match: SGN-E389953
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C169122Clone name: TUS-4-O8
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C169122 [TUS-4-O8] Trace: SGN-T191020 EST: SGN-E389694 Direction: 3' Facility: Avesthagen
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Sequence 
Sequence Id: SGN-E389953Length: 735 bp (788 bp untrimmed)
Status: Current VersionDirection: 5' [See links to 3' reads above]
>SGN-E389953 [] (trimmed) ATCTAGTGGATGCCCGGGCTGCAGGCAAATTCAAGCCATTCTTCACTCAAAATTAAGAATACCAAACTCTCTTATCTTTTAAATTCATCAAAAAA
AATGGGAAAACTTTTGGCTGTGACTTTTTTGTTCATGTGTTGTGTTGTTCCAAGTTTGGCCAAAGTTTATACTGTTGGAGACTCATCTGGATGGG
GACTTGGTGTGGATTATACCACTTGGGCTAGTGGAATCACTCTTAATGTTGGTGATTCACTTGGTAAGTTTTCTCCCCCATATATACACATTTTT
TTTACTTAAACAAATCTAGAAATTATCATTACATATGAAAATATCAGGTAATCATAACAAACTCCCTTTATTTTAATTTATATGACATCATATAT
ATATTTAAAAAATGAAAAAAAAAAATTTAACTTATCATTTAAAACAAACCTTAGACAATAGACGTACTATAGAAATTCGCCATTTTCTGAACGTC
GTTGAGATAATGCATAAAAAGCTATAAATTCTTCGCGGAGATAAAATGAAAAATTTGAAGTTAATTAAATTGCTTTTAAATATAGAAAAATAGTA
TTCTTTCTGCTACATAAGTTTATATGTCAAGTAATTTGAGATAAAAAGAGTATCTTTTACGTTATGTATATAAATTAAACACGTAATATTTTTGT
AGTTTTCAACTATCCAAGTGGTCACACGGTAGATGAAGTAAGTTCTAGTGACTACTCTTCATGCACTACC
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E389953] SGN-U583177 Tomato 200607 Build 2 5 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T191279 [Download] [View] Facility Assigned ID: TUS04-O8.T3
Submitter: Koni Sequencing Facility: Avesthagen
Funding Organization: Italian Ministry of Agriculture and Forestry (MiPAF)
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: No vector sequence detected
Passed all screens and filters
Sequence Entropy: 0.923 Expected Error Rate: 0.0033 Quality Trim Threshold: 20.5