EST details — SGN-E389973
| Search information |
| Request: 389973 | Match: SGN-E389973 |
| Request From: SGN database generated link | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C168801 | Clone name: TUS-4-A23 |
| ||
| Library Name: TUS | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:
Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C168801 [TUS-4-A23] | Trace: SGN-T190775 | EST: SGN-E389449 | Direction: 5' | Facility: Avesthagen |
| Sequence |
| Sequence Id: SGN-E389973 | Length: 784 bp (809 bp untrimmed) |
| Status: Current Version | Direction: 3' [See links to 5' reads above] |
>SGN-E389973 [] (trimmed)
TGTGCATTTGACAATCGTTACAAATTTAATACATATTTGTACATCCAAAACTAATCCCTTTAGCTACTTCAAGTCTAAAACCAAAAAGAGACATT
TACAATTCAAGAATATGGAATCAATTGCACAATCTTGATCAAGCCAAATAATCACATACCCAACGTAATCCCAAGGTTCAAGAAGGGTAGAGTGT
ACACAAACCTTACCCTTACCTCGTAGAAATAGAGAGGTTGTTTACGAAAAAATAAAACAATCTTGATCAAGCCAAACTAGTGGCAAAATTCCATC
TATACACCTAAAGACTCTTGGGACCAAGCAGCAGCTAGGGCTGATAAAGATTATGCCAATGCCTCTTCGTAGAAATCTGAATCATTGTTAGCATT
TCTTTATCTCATAAAAAGAACTACGTTCATCGTCACTACTGTCTGACCCTTCCTCAATCTCGTTGTCATTTGATGTTCCATTAAGAGTTCGGTGA
GAACTCCAATCAGGTGGGAAGGTCTTTTGAAGGGATTTTGTTATATCACCACCAGTCCTCTCAATTTTTCTCAAGCACTTGGACCAATGAACTGC
AGTTCCCATATCAACAGTCAATCCAGACTCCACCATCTCTTCACAAACATGTTGGATTCTCGTTATAATGTAATCTTNGATCAGCACTGCCGCCC
TTGACAACAATGATGTCATTAAACAGTGGTATACAGCTTTGTCAGGTTTCAAACCAGACTGCTTCATCTGTTCAAAACATTTTCAACCCTTCTCG
GGAAGAAGAAGCCGTGCCCAACAT
TACAATTCAAGAATATGGAATCAATTGCACAATCTTGATCAAGCCAAATAATCACATACCCAACGTAATCCCAAGGTTCAAGAAGGGTAGAGTGT
ACACAAACCTTACCCTTACCTCGTAGAAATAGAGAGGTTGTTTACGAAAAAATAAAACAATCTTGATCAAGCCAAACTAGTGGCAAAATTCCATC
TATACACCTAAAGACTCTTGGGACCAAGCAGCAGCTAGGGCTGATAAAGATTATGCCAATGCCTCTTCGTAGAAATCTGAATCATTGTTAGCATT
TCTTTATCTCATAAAAAGAACTACGTTCATCGTCACTACTGTCTGACCCTTCCTCAATCTCGTTGTCATTTGATGTTCCATTAAGAGTTCGGTGA
GAACTCCAATCAGGTGGGAAGGTCTTTTGAAGGGATTTTGTTATATCACCACCAGTCCTCTCAATTTTTCTCAAGCACTTGGACCAATGAACTGC
AGTTCCCATATCAACAGTCAATCCAGACTCCACCATCTCTTCACAAACATGTTGGATTCTCGTTATAATGTAATCTTNGATCAGCACTGCCGCCC
TTGACAACAATGATGTCATTAAACAGTGGTATACAGCTTTGTCAGGTTTCAAACCAGACTGCTTCATCTGTTCAAAACATTTTCAACCCTTCTCG
GGAAGAAGAAGCCGTGCCCAACAT
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E389973] | SGN-U579339 | Tomato 200607 | Build 2 | 5 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T191299 [Download] [View] | Facility Assigned ID: TUS04-A23.Td |
| Submitter: Koni | Sequencing Facility: Avesthagen |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.968 | Expected Error Rate: 0.0078 | Quality Trim Threshold: 20.5 |
Working
