EST details — SGN-E390027
| Search information |
| Request: 390027 | Match: SGN-E390027 |
| Request From: SGN database generated link | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C168989 | Clone name: TUS-4-I19 |
| ||
| Library Name: TUS | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:
Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C20357 [cLED-2-D24] | Trace: SGN-T48912 | EST: SGN-E228264 | Direction: 5' | Facility: TIGR |
| Clone: SGN-C168989 [TUS-4-I19] | Trace: SGN-T191172 | EST: SGN-E389846 | Direction: 5' | Facility: Avesthagen |
| Sequence |
| Sequence Id: SGN-E390027 | Length: 694 bp (794 bp untrimmed) |
| Status: Current Version | Direction: 3' [See links to 5' reads above] |
>SGN-E390027 [] (trimmed)
TTTGACTGCTAACAGTCATACCTACACTTGAGAATTCAGAAACCTGGTCCAATTTACGTTGAAATATTGTGGTTCAGGGAGCTCAGTGATCTAAT
ACCTTTCGAAAGGCTGTTTGCAACTCGACATACAAAGGAATGCACCTAAAGCACAAATACAGAACCATCACAACTACATATCTACATCATCTGCA
GGTGAAGATCAGCATCCTGCTGCGCAAGCTCCACCATCATAGCTTCATCAAAGAACTTGTTGATGCTCACATCTTCACTCATTCCCTTTCTACGC
CTTGTCTTCACCATGAACTCACGAGCCAGATGTTGGATTGGAGCAGGCTCCAGTGGTCGTAGAACGATGCTCTTGTCAAGAGGATCCCCGGGGAC
AATAGCCCAATGATCAAATACTGAAAGACAAAACGCCTGCCCTTGGGTGTGATACCTCAAGTCCGTTTCAAAACCAAAGGACTCGATAACGGGTA
AAAATGCCTTGACAATGTAGGCAGGGGTGCCAGGTTGAGGAACATCAGCAGTAACGTGTCCACGCCTACGTGACAACACGGTGTATATAGCAGAG
AGACAATCCATGGGCGTTTGGATCTCCACATAATACACAGGTTCCATAAGTCTGGGTGTTGCCATAAGAAAAGCAGAGTAGGCTACACGTCGTGC
AGTTGGAATAATCTGACCCGTTCCACCTG
ACCTTTCGAAAGGCTGTTTGCAACTCGACATACAAAGGAATGCACCTAAAGCACAAATACAGAACCATCACAACTACATATCTACATCATCTGCA
GGTGAAGATCAGCATCCTGCTGCGCAAGCTCCACCATCATAGCTTCATCAAAGAACTTGTTGATGCTCACATCTTCACTCATTCCCTTTCTACGC
CTTGTCTTCACCATGAACTCACGAGCCAGATGTTGGATTGGAGCAGGCTCCAGTGGTCGTAGAACGATGCTCTTGTCAAGAGGATCCCCGGGGAC
AATAGCCCAATGATCAAATACTGAAAGACAAAACGCCTGCCCTTGGGTGTGATACCTCAAGTCCGTTTCAAAACCAAAGGACTCGATAACGGGTA
AAAATGCCTTGACAATGTAGGCAGGGGTGCCAGGTTGAGGAACATCAGCAGTAACGTGTCCACGCCTACGTGACAACACGGTGTATATAGCAGAG
AGACAATCCATGGGCGTTTGGATCTCCACATAATACACAGGTTCCATAAGTCTGGGTGTTGCCATAAGAAAAGCAGAGTAGGCTACACGTCGTGC
AGTTGGAATAATCTGACCCGTTCCACCTG
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E390027] | SGN-U576416 | Tomato 200607 | Build 2 | 13 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T191353 [Download] [View] | Facility Assigned ID: TUS04-I19.Td |
| Submitter: Koni | Sequencing Facility: Avesthagen |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.986 | Expected Error Rate: 0.0088 | Quality Trim Threshold: 14.5 |
Working
