EST details — SGN-E390053

Search information 
Request: 390053Match: SGN-E390053
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C169081Clone name: TUS-4-M15
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C20578 [cLED-2-P21] Trace: SGN-T48762 EST: SGN-E228114 Direction: 5' Facility: TIGR
Clone: SGN-C169081 [TUS-4-M15] Trace: SGN-T191237 EST: SGN-E389911 Direction: 5' Facility: Avesthagen
[Show information hierarchy]
Sequence 
Sequence Id: SGN-E390053Length: 731 bp (767 bp untrimmed)
Status: Current VersionDirection: 3' [See links to 5' reads above]
>SGN-E390053 [] (trimmed) AATACGATACAAGATCCAACATCCACTATTGAGTGTACATGAACCCACACGTTACATTGCGGCTCTGCCTCACGAAGCCCAAAACGACATGGCAT
AGATGTTTTGTATTTTGTGCAGGAAGAATATAATGCATTCCCAGTTACACATATTTAAACGTTACAGTCCCTTATGCACATAATATGAGTTAACA
GATCTTCATTACTGTCTCTGTCTATATTCAGAGAACCAAGCAAACCACAGTTGGTGTTCTAGTATGTTAATTTTGTAGTACATTTCTAAGACTGC
ATGCTCTTACATCTCAGCAGTAAACGATTTTCCACAACCACAAGTTTGCGTAGCGTTTGGATTTTTGAAAGAGAAGCCCCCGCCTATCAATGCAT
CGCTGTAGTCCAGTTGCATTCCGAAGATGAAGAGAAGGCTTTTTGGATCACAAACTGAAAGAAAGGGTTGATGCAACAAAAATTTCTTATTTAAA
TGTCAATAATCACTCGAAAAGAAAACAGAAACAAGTAGCTAGCACGCATAACTTACAAATATAAGAGTGAAATAGTACTGGTTTCTTGTATGGAC
CCAACACTAAAAGCTTTAACTACTTCATGAGTAAAAAACGCCACACAATGGGCAAGGGGAACTTACTGAATCAAGGGTATTAAAATTCGTCTCAA
AGTGAACTAATCTAAGTAGATGGGTATGACTGCTAGCTTTAGAAGCATACAAGAGCTAAATATAGG
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E390053] SGN-U575653 Tomato 200607 Build 2 9 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T191379 [Download] [View] Facility Assigned ID: TUS04-M15.Td
Submitter: Koni Sequencing Facility: Avesthagen
Funding Organization: Italian Ministry of Agriculture and Forestry (MiPAF)
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: No vector sequence detected
Passed all screens and filters
Sequence Entropy: 0.967 Expected Error Rate: 0.0042 Quality Trim Threshold: 20.5