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EST details — SGN-E391377

Search information 
Request: 391377Match: SGN-E391377
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C185753Clone name: TUS-48-D7
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: SGN-C185753 is on microarray TOM1 spot ID 1-1-2.4.7.4 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C185753 [TUS-48-D7] Trace: SGN-T192525 EST: SGN-E391199 Direction: 5' Facility: INRA
[Show information hierarchy]
Sequence 
Sequence Id: SGN-E391377Length: 550 bp (941 bp untrimmed)
Status: Current VersionDirection: 3' [See links to 5' reads above]
>SGN-E391377 [] (trimmed) AAAAAAATGCAAAACAACAAGGAGCAAATTAGCACATTTGCAGTACATACAACAACATGCTCTACAGTCTTTGGTAGTTTGAGGCTTGCTGTCTA
CTAGCATAATTACCATTTCCCAGCATATCTTTTACATGCAAATATAAATATGCTCCATTCCAACTATTACACATACTGTTTAACTTGTATAATAA
TACTAATGGCATCTCTACTGCCTACTATTGCTCAAAAATAACACTCATCAGCCTTTGCACTTAGGGGTACACTTGCCCACATGGTCCTTGAAATG
TTGCATCTCAGCCAAAACTTCAGCCTTCGGCCGGTACAACATATCAATCATACGCCATATCTGTAATGTGCCCCCTCCACCAGAGGTCTCTGCAT
CATCAGATACACTAACAATAGTCCATGGATCACAAGCATTCCAGTGAAAGTCCACAATCTTATCCCTGTGGCCAGCATGCTGAAAAAACAAGCCT
GGAGGAGACTCCTCTTCATCTTCATCAGATTCAATATCAAAAATCTTTTGCTGCGCCAACCTTCCTCATAGTCCC
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E391377] SGN-U563436 Tomato 200607 Build 2 33 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T192703 [Download][View] Facility Assigned ID: FA0AAD36CB04FM1
Submitter: Koni Sequencing Facility: INRA
Funding Organization: Funding for 5' and 3' resequencing of TOM1 microarray clones was provided by INRA. Sequencing was performed by Genoscope, Evry cedex, France. \ \ \
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 3' sequence read -- flanking 5' vector arm detected.
Passed all screens and filters
Sequence Entropy: 0.950 Expected Error Rate: 0.0154 Quality Trim Threshold: 12.5