EST details — SGN-E391496

Search information 
Request: 391496Match: SGN-E391496
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C173443Clone name: TUS-16-C9
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: SGN-C173443 is on microarray TOM1 spot ID 1-1-8.3.18.11 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C2586 [cLEC-16-I10] Trace: SGN-T27022 EST: SGN-E205133 Direction: 5' Facility: TIGR
Clone: SGN-C173443 [TUS-16-C9] Trace: SGN-T192823 EST: SGN-E391497 Direction: 5' Facility: INRA
[Show information hierarchy]
Sequence 
Sequence Id: SGN-E391496Length: 673 bp (906 bp untrimmed)
Status: Current VersionDirection: 3' [See links to 5' reads above]
>SGN-E391496 [] (trimmed) ATAAATTACATTTCTTTAGCATATTAATATGAGGAAAAACTTCATCTTAAAATGTTACCCAAAGTTTTTATAGTTTGACTCAAAAAATAGAAAAT
AGAAACCAGTACCGGACGAAGGGAGTATCGGTAACAACCAGGGTACAAGTTTCTTGGAGGCAATTGCAAGGAGAAAGCATAGCTAAACGACACAA
TATTTTCATACCAATACGAAAATTTACACAAGGTCATCATTCGAGCTAATGTTTTTCGAGTCCTTTGGGTTTATTATACTCTAAAACTTACGCGG
AACACCAAGAGTTTGGTCACTACTGTCTAGGAGGCAGGAGCCCCACTGCTTACCTCCAAACCATTTCCATCTGGATCAAAGAAAAAGGCTTGTTT
GGTCTTGCCATCCGGTTGAGTCCTCTCATGAACTTCAATTCCGTTATCCTTGAGCTTCTGAACAAAGGAATCGAAATTGGAGATGGTGAAGCAGA
CATGGTGACCTCTGGGCAGATTCTTCGGGTCAGCGATGGCTGACGTGGCACTCCATGGACCTTCTGGAAGCTTCGTAGTCGGGTCTCTCTCGATA
AGGTGAAGATAAAAGGACGGTGCCAGCTTCAACCATATCACATCAAATTCAAATCTTGGAGCTTCAACTTTCTGAAACCCAAATATCTCAATGTA
AAATTGGG
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E391496] SGN-U582631 Tomato 200607 Build 2 14 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T192822 [Download][View] Facility Assigned ID: FA0AAD4AB05FM1
Submitter: Koni Sequencing Facility: INRA
Funding Organization: Funding for 5' and 3' resequencing of TOM1 microarray clones was provided by INRA. Sequencing was performed by Genoscope, Evry cedex, France. \ \ \
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 3' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.969 Expected Error Rate: 0.0053 Quality Trim Threshold: 14.5