EST details — SGN-E391545
Search information |
Request: 391545 | Match: SGN-E391545 |
Request From: SGN database generated link | Match Type: EST sequence internal identifier |
Clone information |
SGN ID: SGN-C173591 | Clone name: TUS-16-I13 |
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Library Name: TUS | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:
Microarray: SGN-C173591 is on microarray TOM1 spot ID 1-1-4.1.18.13 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing |
Clone: SGN-C3530 [cLEC-20-O13] | Trace: SGN-T27735 | EST: SGN-E205953 | Direction: 5' | Facility: TIGR |
Clone: SGN-C173591 [TUS-16-I13] | Trace: SGN-T192870 | EST: SGN-E391544 | Direction: 3' | Facility: INRA |
Sequence |
Sequence Id: SGN-E391545 | Length: 654 bp (872 bp untrimmed) |
Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E391545 [] (trimmed)
GGAGGTGAACCCATACGTTAAACCAAAGGAAAGAGCACAACATTTTCATATGAAATTGAATTTGTTTGTTTGTTTGTTGTTTTACATGAATCTCC
GGCAATGAATAGGGCGGCGTTAATCAGCTCTCAGGTTAACCCTATTCACATAAGGGCCTCTCTTTTTCATTCTTCCCCAATCTTGGAACGCAGAA
GACGCACACATTGGGATTCTGGAAAAAGTGCCAATAAAGGCTCATCAAGGAAATCATTCTTCTCCAGAAGATATAGGAAGCTTAACTCAAGGAAG
GCACTGTTTGAGAGTGTGAATGGATTTGCTGAACAGTTTTTCCAGAGCTGGCAGCATGACCGTGACGAATATGACCCATCTTCAAGCCGAGACAG
TTCATGGTTTAGACGAGATTTCAGGGCCAGTGGACACAAAGGGGGAAGATCAAAGAACACGGGACAGCATCAACACAGGGTGTTCCAATTCTTGG
AGGAGGAGGATATCGAGATAGAGACCTTTTTCGGTTCTACATTTGGTGGAAACAGATACTATCATTGGTCATTTATTAATGAAGAACCACAATGG
AGGAACTCATCAAACTACTCTAACAGCCGTCAGTGGAGTTGGCGGAATCAGTACTCGGACTATGATGAGTCAACAGACTCTGAG
GGCAATGAATAGGGCGGCGTTAATCAGCTCTCAGGTTAACCCTATTCACATAAGGGCCTCTCTTTTTCATTCTTCCCCAATCTTGGAACGCAGAA
GACGCACACATTGGGATTCTGGAAAAAGTGCCAATAAAGGCTCATCAAGGAAATCATTCTTCTCCAGAAGATATAGGAAGCTTAACTCAAGGAAG
GCACTGTTTGAGAGTGTGAATGGATTTGCTGAACAGTTTTTCCAGAGCTGGCAGCATGACCGTGACGAATATGACCCATCTTCAAGCCGAGACAG
TTCATGGTTTAGACGAGATTTCAGGGCCAGTGGACACAAAGGGGGAAGATCAAAGAACACGGGACAGCATCAACACAGGGTGTTCCAATTCTTGG
AGGAGGAGGATATCGAGATAGAGACCTTTTTCGGTTCTACATTTGGTGGAAACAGATACTATCATTGGTCATTTATTAATGAAGAACCACAATGG
AGGAACTCATCAAACTACTCTAACAGCCGTCAGTGGAGTTGGCGGAATCAGTACTCGGACTATGATGAGTCAACAGACTCTGAG
Unigenes |
Current Unigene builds | |||||
[SGN-E391545] | SGN-U575634 | Tomato 200607 | Build 2 | 7 ESTs assembled | |
Follow SGN-U# link for detailed information and annotations |
Chromatogram |
SGN-ID: SGN-T192871 [Download][View] | Facility Assigned ID: FA0AAD4AE07RM1 |
Submitter: Koni | Sequencing Facility: INRA |
Quality processing |
Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
Sequence Entropy: 0.970 | Expected Error Rate: 0.0031 | Quality Trim Threshold: 14.5 |