EST details — SGN-E391545

Search information 
Request: 391545Match: SGN-E391545
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C173591Clone name: TUS-16-I13
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: SGN-C173591 is on microarray TOM1 spot ID 1-1-4.1.18.13 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C3530 [cLEC-20-O13] Trace: SGN-T27735 EST: SGN-E205953 Direction: 5' Facility: TIGR
Clone: SGN-C173591 [TUS-16-I13] Trace: SGN-T192870 EST: SGN-E391544 Direction: 3' Facility: INRA
[Show information hierarchy]
Sequence 
Sequence Id: SGN-E391545Length: 654 bp (872 bp untrimmed)
Status: Current VersionDirection: 5' [See links to 3' reads above]
>SGN-E391545 [] (trimmed) GGAGGTGAACCCATACGTTAAACCAAAGGAAAGAGCACAACATTTTCATATGAAATTGAATTTGTTTGTTTGTTTGTTGTTTTACATGAATCTCC
GGCAATGAATAGGGCGGCGTTAATCAGCTCTCAGGTTAACCCTATTCACATAAGGGCCTCTCTTTTTCATTCTTCCCCAATCTTGGAACGCAGAA
GACGCACACATTGGGATTCTGGAAAAAGTGCCAATAAAGGCTCATCAAGGAAATCATTCTTCTCCAGAAGATATAGGAAGCTTAACTCAAGGAAG
GCACTGTTTGAGAGTGTGAATGGATTTGCTGAACAGTTTTTCCAGAGCTGGCAGCATGACCGTGACGAATATGACCCATCTTCAAGCCGAGACAG
TTCATGGTTTAGACGAGATTTCAGGGCCAGTGGACACAAAGGGGGAAGATCAAAGAACACGGGACAGCATCAACACAGGGTGTTCCAATTCTTGG
AGGAGGAGGATATCGAGATAGAGACCTTTTTCGGTTCTACATTTGGTGGAAACAGATACTATCATTGGTCATTTATTAATGAAGAACCACAATGG
AGGAACTCATCAAACTACTCTAACAGCCGTCAGTGGAGTTGGCGGAATCAGTACTCGGACTATGATGAGTCAACAGACTCTGAG
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E391545] SGN-U575634 Tomato 200607 Build 2 7 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T192871 [Download][View] Facility Assigned ID: FA0AAD4AE07RM1
Submitter: Koni Sequencing Facility: INRA
Funding Organization: Funding for 5' and 3' resequencing of TOM1 microarray clones was provided by INRA. Sequencing was performed by Genoscope, Evry cedex, France. \ \ \
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.970 Expected Error Rate: 0.0031 Quality Trim Threshold: 14.5