EST details — SGN-E392057

Search information 
Request: 392057Match: SGN-E392057
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C176647Clone name: TUS-24-H21
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: SGN-C176647 is on microarray TOM1 spot ID 1-1-4.4.9.19 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C27184 [cLEF-42-M4] Trace: SGN-T60594 EST: SGN-E247550 Direction: 5' Facility: TIGR
Clone: SGN-C176647 [TUS-24-H21] Trace: SGN-T197854 EST: SGN-E396528 Direction: 5' Facility: INRA
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Sequence 
Sequence Id: SGN-E392057Length: 692 bp (829 bp untrimmed)
Status: Current VersionDirection: 3' [See links to 5' reads above]
>SGN-E392057 [] (trimmed) TGCCTGAACTTCCATGAATTTTCTAACTATTAAATTACGTGTTGTATTCATTTTCTTCTTAACAATTCAAATCCGCCATTTCTGTGTAGCTCAAA
AAGCTTGTTACTAAAATGGCGAATTCCGGTCCTCTGAACCCAAACCCGGTTCCGAACTCCGATCGTCTCGAACAACTGAAACAATTCGATGAGTC
GAAAATTGGAGTTAAAGGGCTTGTTGATAAGGGCCTTACTACTATACCCAGTTTCTTCATCCACTCAGAAGAATCAAACCCGGAACCCAAAACCC
GATCAAGTAACAATCACTGCATACCCGTCGTCGACTTTTCTGCTTCTCGGGAAACAGTCGTTGAACAAGTTCATCGTGCTTCAACGAGCTTAGGG
TTCTTCCAGATTATCAACCATTCTGTTCCGGTCAGTGCTATAAATAGAATTGTAGGTTCGATTAAATCGTTTAACGAACAGAATAATGAATTGAA
GATGAAGTATTATAGTAGGGATATTACTCATGGAGCAGCGTATTCTACGAATTTTGATTTGTATAACTCGAAAGCTGCAAGCTGGAGGGATACGT
TGCAGGTGAGATTGTCGCCTACTCCACCGGATTGGGAGTATGTGCCGGAGGTGTGTAGGGAGGCGGTGATGGAGTGGGATAAGGAAGTGGTGAAA
ATTGGGGAAGAATTGATGGGTTTGTTG
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E392057] SGN-U570114 Tomato 200607 Build 2 22 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T193383 [Download][View] Facility Assigned ID: FA0AAD12CD11FM1
Submitter: Koni Sequencing Facility: INRA
Funding Organization: Funding for 5' and 3' resequencing of TOM1 microarray clones was provided by INRA. Sequencing was performed by Genoscope, Evry cedex, France. \ \ \
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 3' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.984 Expected Error Rate: 0.0024 Quality Trim Threshold: 14.5