EST details — SGN-E392111

Search information 
Request: 392111Match: SGN-E392111
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C176598Clone name: TUS-24-F20
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: SGN-C176598 is on microarray TOM1 spot ID 1-1-5.2.9.19 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C176598 [TUS-24-F20] Trace: SGN-T193438 EST: SGN-E392112 Direction: 5' Facility: INRA
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Sequence 
Sequence Id: SGN-E392111Length: 719 bp (869 bp untrimmed)
Status: Current VersionDirection: 3' [See links to 5' reads above]
>SGN-E392111 [] (trimmed) CTATTTTTGGTAAAGAGCCAGCTTATACATCCGAACTAGTGATGTGGTCTACTAAGCAGACTGAGGCATTTGCACTTTTGGTCAAAAGACATGCA
TTAACTTCATCAGCAGCTGCTGGTGGCTTACGTGCTGCTGCAGAATGTGTTCAAATAGCTTTAGGACACTGTTCCTTGTTGGAAGCTCGTGGACT
TGCACTTTGTCCTGTGCTTCTGAAGCTTTTTAGACCAAGCGTTGAGCAAGCGCTAGATGCCAACTTAAAACGAATTGAAGAAAGCACTGCTGCTT
TGGCAGCTGCTGATGATTGGGAACTCACATATCCACCGTCTGTTACACGCGCATCCGGTAGGTCAGCTGGTGCTGTTCCTGGTTCTACAGGGGCA
TATCAGCATAAACTTTCAAGTAGTGCGCACCGATTCAATTTGATGGTTCAGGATTTCTTTGAGGACGTGGGACCATTGCTAAGTATGCAGTTGGG
AGGGAAAGCTTTGGAAGGTCTATTTCAAGTGTTTAATACATACGTGAACACACTTGTAAGAGCATTACCTGGCTCCATGGAGGATGAAGCCAGCT
ATGAAGATTCAGGGAATAAAATTGTTAGAATGGCTGAGACTGAAGCTCAACAAATTGCTTTGCTTGCAAATGCATCTCTATTGGCGGACGAACTA
TTGCCACGTGCAACTATGAAACTTGCTCCCTTGGCTAATCAAAAGGATGATCTT
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E392111] SGN-U583889 Tomato 200607 Build 2 27 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T193437 [Download][View] Facility Assigned ID: FA0AAD12DC10FM1
Submitter: Koni Sequencing Facility: INRA
Funding Organization: Funding for 5' and 3' resequencing of TOM1 microarray clones was provided by INRA. Sequencing was performed by Genoscope, Evry cedex, France. \ \ \
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 3' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.976 Expected Error Rate: 0.0036 Quality Trim Threshold: 14.5