EST details — SGN-E392235

Search information 
Request: 392235Match: SGN-E392235
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C181232Clone name: TUS-36-G22
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: SGN-C181232 is on microarray TOM1 spot ID 1-1-3.3.14.4 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C15287 [cLED-11-H7] Trace: SGN-T51365 EST: SGN-E235355 Direction: 5' Facility: TIGR
Clone: SGN-C181232 [TUS-36-G22] Trace: SGN-T193804 EST: SGN-E392478 Direction: 3' Facility: INRA
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Sequence 
Sequence Id: SGN-E392235Length: 595 bp (823 bp untrimmed)
Status: Current VersionDirection: 5' [See links to 3' reads above]
>SGN-E392235 [] (trimmed) CAGATTGCAACACCACCAAGTGAGATGGACAATGAAGTGGGCAGAGCGGATCCTGAAGCATCTGCTGCTCCCATGGATACAGATGCAGGAATAGC
TACTGTTAACATATGTCAGGAAGAAACTCCTACTCCGGAGGATAACCAGAAGCAAAGCTCTGACACAGATGTTGCTCAAGAAGCAGGGCAGATTG
AAGCAGACACAGAAGCAGAGACGGGGATGATTGATGGAGAAACAGATGCAGAAGATCTAGATACAGCAGGATAATCCAAGTGTGTATTGGATTGT
GCACCATGCCGGTGTAACTTGTGTCAACAATCCACTTAATCTGGGCTCAATTTGTACCATGTAACTTAAGTCAGTTGCTTAAGAAGCTTGACAGC
AAAAAAAAAAATAAATTAAAAATTACACAATTTAGAATTAATTACACATTTTTGCATAGATCTTAATTGTTGAGAGGTGGGATTTGTTGCAAGTG
AGATTGAAGGATGGGTGTTGTGTATTAAATTATTAATAATACCTCTTTTTATGTTGTTTGGTTGATTACGCAAGTTCTATTTCTTGTTGATACTC
TATTATGTAATAATTGTCTTAGATT
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E392235] SGN-U567368 Tomato 200607 Build 2 9 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T193561 [Download][View] Facility Assigned ID: FA0AAD24BD11RM1
Submitter: Koni Sequencing Facility: INRA
Funding Organization: Funding for 5' and 3' resequencing of TOM1 microarray clones was provided by INRA. Sequencing was performed by Genoscope, Evry cedex, France. \ \ \
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read -- flanking 3' vector arm detected.
Passed all screens and filters
Sequence Entropy: 0.950 Expected Error Rate: 0.0011 Quality Trim Threshold: 12.5