EST details — SGN-E392245

Search information 
Request: 392245Match: SGN-E392245
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C181308Clone name: TUS-36-K2
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: SGN-C181308 is on microarray TOM1 spot ID 1-1-7.3.15.18 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C15407 [cLED-11-N2] Trace: SGN-T51594 EST: SGN-E235584 Direction: 5' Facility: TIGR
Clone: SGN-C181308 [TUS-36-K2] Trace: SGN-T199182 EST: SGN-E397856 Direction: 5' Facility: INRA
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Sequence 
Sequence Id: SGN-E392245Length: 703 bp (841 bp untrimmed)
Status: Current VersionDirection: 3' [See links to 5' reads above]
>SGN-E392245 [] (trimmed) AACATCTGAATGTACATCAATTAATTAGAAGAGAAGCTGTAACAAAAACTTACAGAAGGACTAATCCTTATACCCATACTAACCGTCTTGGCACT
CTATCAAGCATTTGTTTGATTCTTGTAACAAAGAAAATGTAGAAGTCAAAGACACTAGCATCTACGGGTCTGTTATGATGAATTTGTGATTTCTA
GGTTGATTTCAATCTAGAGGTTATTAGAGAAATTTATAAACAAATCGGTAACATATAAATTAAGTTTTTACATTATCGACGAAAATGGATATTTA
CAACTGATGCCTGCAGAAACAAGGTTTGTTGAACAGAAAGTGCAAGGGGTAATATTGGGTGGAAGAGGAAGGAACAGATCTTCTTAGTTCGCCCA
TCTGTGCTGCCAGCTTCAGGTCCTGGCTTCATTTTGAATTTCAGGATATTGGGTTGTCTTCTAGAAATGAATTTGATTGGATGGTCAGTAGACTG
TCTATGGCGGTCAATAGCTGAAATAAGCTTCTCGTCAAACCTGAAGAGAGATTGAATACCTTGAAAACTTGAAGCTGATAAATGATAGTAGCATT
CAAACAAGTAAGTTACGCCTTCCACCTGCATACATATTTCCAACAAAGTTGAGGAAGCTGACTTTATTAGACACGTGGTTGGAGTGGAAAGATAT
GTCTATATTGGGTCAGTTGGAACACCTTGAAATCCTGA
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E392245] SGN-U565364 Tomato 200607 Build 2 3 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T193571 [Download][View] Facility Assigned ID: FA0AAD24BF01FM1
Submitter: Koni Sequencing Facility: INRA
Funding Organization: Funding for 5' and 3' resequencing of TOM1 microarray clones was provided by INRA. Sequencing was performed by Genoscope, Evry cedex, France. \ \ \
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 3' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.956 Expected Error Rate: 0.0023 Quality Trim Threshold: 14.5