EST details — SGN-E392598

Search information 
Request: 392598Match: SGN-E392598
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C180763Clone name: TUS-35-D9
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: SGN-C180763 is on microarray TOM1 spot ID 1-1-8.4.17.14 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C69199 [cLEN-9-G1] Trace: SGN-T88936 EST: SGN-E275064 Direction: 5' Facility: TIGR
Clone: SGN-C180763 [TUS-35-D9] Trace: SGN-T193923 EST: SGN-E392597 Direction: 3' Facility: INRA
[Show information hierarchy]
Sequence 
Sequence Id: SGN-E392598Length: 642 bp (855 bp untrimmed)
Status: Current VersionDirection: 5' [See links to 3' reads above]
>SGN-E392598 [] (trimmed) CAATGGCGGAAGTTACTAAAATTCTCCAACCAGTTCTTCTTCCTCCTTTCTTCCATAAACTAGACGGAACCACTAATTCCCATTTTAGATTGTGT
AGAAGAAACAGACGCAACATCAGTATCCGTTGTTCTTCAATTTCTACAACTGAAACTAACAAATCCACAAAGACTCAGAACATTCCATGGGGTTG
CGAGACTGATTCTATAGAAAATGCGTCCAATTTGCAGAAATGGTTGACGGAATCAGGGCTTCCTGCTCAAAAATTGGACTTACAAAGAGTGAATG
TTGGAGAAAGAGGACTTGTTGCTAACAACAATATTAGGAAAGGGGAAAGGCTGCTTTTTGTTCCTCCTTCACTTGTCATCACTGCTGATTCGAAA
TGGAGCAATTCAGATGCTGGTGATGTTTTAAAACAATATAATGTACCAGATTGGCCTTTTATTGCTACATATTTAATAAGTGAGGCAAGCCTCAT
GAAGTCTTCAAGATGGAGCAACTACATATCTGCCTTGCCTAGGCAGCCTTACTCTCTCTTATACTGGACTCAATCGGAGTTAGATAGGTACTTGG
AAGCATCACAAATAAGACAGCGGGCGGTTGAAAGGATAAATAACGTCTTTGGAACGTACAATGACTTAAGGC
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E392598] SGN-U563777 Tomato 200607 Build 2 12 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T193924 [Download][View] Facility Assigned ID: FA0AAD23CB05RM1
Submitter: Koni Sequencing Facility: INRA
Funding Organization: Funding for 5' and 3' resequencing of TOM1 microarray clones was provided by INRA. Sequencing was performed by Genoscope, Evry cedex, France. \ \ \
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.972 Expected Error Rate: 0.0007 Quality Trim Threshold: 14.5