EST details — SGN-E392598
Search information |
Request: 392598 | Match: SGN-E392598 |
Request From: SGN database generated link | Match Type: EST sequence internal identifier |
Clone information |
SGN ID: SGN-C180763 | Clone name: TUS-35-D9 |
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Library Name: TUS | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:
Microarray: SGN-C180763 is on microarray TOM1 spot ID 1-1-8.4.17.14 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing |
Clone: SGN-C69199 [cLEN-9-G1] | Trace: SGN-T88936 | EST: SGN-E275064 | Direction: 5' | Facility: TIGR |
Clone: SGN-C180763 [TUS-35-D9] | Trace: SGN-T193923 | EST: SGN-E392597 | Direction: 3' | Facility: INRA |
Sequence |
Sequence Id: SGN-E392598 | Length: 642 bp (855 bp untrimmed) |
Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E392598 [] (trimmed)
CAATGGCGGAAGTTACTAAAATTCTCCAACCAGTTCTTCTTCCTCCTTTCTTCCATAAACTAGACGGAACCACTAATTCCCATTTTAGATTGTGT
AGAAGAAACAGACGCAACATCAGTATCCGTTGTTCTTCAATTTCTACAACTGAAACTAACAAATCCACAAAGACTCAGAACATTCCATGGGGTTG
CGAGACTGATTCTATAGAAAATGCGTCCAATTTGCAGAAATGGTTGACGGAATCAGGGCTTCCTGCTCAAAAATTGGACTTACAAAGAGTGAATG
TTGGAGAAAGAGGACTTGTTGCTAACAACAATATTAGGAAAGGGGAAAGGCTGCTTTTTGTTCCTCCTTCACTTGTCATCACTGCTGATTCGAAA
TGGAGCAATTCAGATGCTGGTGATGTTTTAAAACAATATAATGTACCAGATTGGCCTTTTATTGCTACATATTTAATAAGTGAGGCAAGCCTCAT
GAAGTCTTCAAGATGGAGCAACTACATATCTGCCTTGCCTAGGCAGCCTTACTCTCTCTTATACTGGACTCAATCGGAGTTAGATAGGTACTTGG
AAGCATCACAAATAAGACAGCGGGCGGTTGAAAGGATAAATAACGTCTTTGGAACGTACAATGACTTAAGGC
AGAAGAAACAGACGCAACATCAGTATCCGTTGTTCTTCAATTTCTACAACTGAAACTAACAAATCCACAAAGACTCAGAACATTCCATGGGGTTG
CGAGACTGATTCTATAGAAAATGCGTCCAATTTGCAGAAATGGTTGACGGAATCAGGGCTTCCTGCTCAAAAATTGGACTTACAAAGAGTGAATG
TTGGAGAAAGAGGACTTGTTGCTAACAACAATATTAGGAAAGGGGAAAGGCTGCTTTTTGTTCCTCCTTCACTTGTCATCACTGCTGATTCGAAA
TGGAGCAATTCAGATGCTGGTGATGTTTTAAAACAATATAATGTACCAGATTGGCCTTTTATTGCTACATATTTAATAAGTGAGGCAAGCCTCAT
GAAGTCTTCAAGATGGAGCAACTACATATCTGCCTTGCCTAGGCAGCCTTACTCTCTCTTATACTGGACTCAATCGGAGTTAGATAGGTACTTGG
AAGCATCACAAATAAGACAGCGGGCGGTTGAAAGGATAAATAACGTCTTTGGAACGTACAATGACTTAAGGC
Unigenes |
Current Unigene builds | |||||
[SGN-E392598] | SGN-U563777 | Tomato 200607 | Build 2 | 12 ESTs assembled | |
Follow SGN-U# link for detailed information and annotations |
Chromatogram |
SGN-ID: SGN-T193924 [Download][View] | Facility Assigned ID: FA0AAD23CB05RM1 |
Submitter: Koni | Sequencing Facility: INRA |
Quality processing |
Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
Sequence Entropy: 0.972 | Expected Error Rate: 0.0007 | Quality Trim Threshold: 14.5 |