EST details — SGN-E394068

Search information 
Request: 394068Match: SGN-E394068
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C172864Clone name: TUS-14-K6
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: SGN-C172864 is on microarray TOM1 spot ID 1-1-3.3.20.3 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C14170 [cLEC-7-B2] Trace: SGN-T25473 EST: SGN-E202191 Direction: 5' Facility: TIGR
Clone: SGN-C172864 [TUS-14-K6] Trace: SGN-T195687 EST: SGN-E394361 Direction: 5' Facility: INRA
Clone: SGN-C172864 [TUS-14-K6] Trace: SGN-T195687 EST: SGN-E399076 Direction: 5' Facility: INRA
Clone: SGN-C172864 [TUS-14-K6] Trace: SGN-T195792 EST: SGN-E394466 Direction: 3' Facility: INRA
Clone: SGN-C172864 [TUS-14-K6] Trace: SGN-T195792 EST: SGN-E399075 Direction: 3' Facility: INRA
Clone: SGN-C172864 [TUS-14-K6] Trace: SGN-T199456 EST: SGN-E398130 Direction: 3' Facility: INRA
[Show information hierarchy]
Sequence 
Sequence Id: SGN-E394068Length: 596 bp (845 bp untrimmed)
Status: Current VersionDirection: 5' [See links to 3' reads above]
>SGN-E394068 [] (trimmed) GAGCAATATCATACAGCTAAAGGAGAAAAGAAGAAGAGATTTTGTTACAAAAATATGGAACGAATTTCCTTAGCAAACAGTTACACACAGGTGAT
GATACATGCAAGAGCTTCTGATACTACAGTTGCACATCTTGCATAATATACAAGTATGGAAGCTCATATGAGTATAAAACTACAAGCTTTTCATG
TCAAAATGTTACATTTGATTATACAGGGGGAAAAGGGATGCACTAATTACTTTATTTCTCCCGCACCACTTTATATCTTGATGGCACAGATAACT
CAACCATTTACACCTACAATTACGCTCACAGGAACTGCAGTTAATGCTCATCCCTTGTTTGCATAAACAGACACATGTTAACTTCCTCAGGTGAT
TAATTAATGGTGTTTTCCCTCTGTAATTTAGGAATCACCACACTAAGCCCTTTCTTCTCCTAAACCTGTCAACACGATCTGTGCTCATCCGCGAC
TTCTCAGGTTTGTTTGACTTCTTAGTCTTTTCAAGTCGACTATCCAAACTGTTCCTTGAAATTTCACGAAGATCAGGTTTCAGGTCAAACGTGTC
GGTGGTACTACCCCTTTCCGCAGGTT
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E394068] SGN-U575206 Tomato 200607 Build 2 20 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T195394 [Download][View] Facility Assigned ID: FA0AAD2BF03RM2
Submitter: Koni Sequencing Facility: INRA
Funding Organization: Funding for 5' and 3' resequencing of TOM1 microarray clones was provided by INRA. Sequencing was performed by Genoscope, Evry cedex, France. \ \ \
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.963 Expected Error Rate: 0.0032 Quality Trim Threshold: 14.5