EST details — SGN-E395653

Search information 
Request: 395653Match: SGN-E395653
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C173886Clone name: TUS-17-E20
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: SGN-C173886 is on microarray TOM1 spot ID 1-1-5.1.17.7 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C6323 [cLEC-35-B19] Trace: SGN-T30681 EST: SGN-E210333 Direction: 5' Facility: TIGR
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Sequence 
Sequence Id: SGN-E395653Length: 651 bp (875 bp untrimmed)
Status: Current VersionDirection: 3' [See links to 5' reads above]
>SGN-E395653 [] (trimmed) TATTAATCCTAACTAGTGATGTGGTCTACTAAGCAGACTGAGGCATTTGCACTTTTGGTCAAAAGACATGCATTAACTTCATCAACAGCTGCTGG
TGGCTTACGTGCTGCTGCCCAATGTGTTCAATTAGCTTTAGGACACTGTTCCTTGTTGGAAGCTCGAGAACTTGCACTTTGTCCTGTGCTTCTGA
ATCTTTTTACACCAAGCGTTGAGCAAGCGCTAGATGCCAACTTAAAACGAATTGAAGAAAACACTGCTGCTTTGGCAGCTGCTGATGATTGGGAA
CTCACATATCCACCGTCTGTTACACGCGCATCCGGTAGGTCAGCTGGTGCTGTTCCTGGTTCTACAAGGGCATATCACCATAAACTTTCAAGTAT
TGCGCACCGATTCAATTTGATGGTTCAAGATTTCTTTGAGGACGTGGGACCATTGCTAACTATGCAGTTGGGAGGGAAAGCTTTGGAAGGTCTAT
TTCAAGTGTTTAATACATACGTGAACACACTTGTAAGAGCATTACCTGGCTCCATGGAGGATGAACCCAGCTATGAAAATTCACGGAATAAAAAT
TGTTAGAATGGCTGAAACTGAAACTCAACAAATTGGCTTTGCTTGCAAATGCATCTCTATTGGCGGACGAACTATTTGCCA
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E395653] SGN-U583889 Tomato 200607 Build 2 27 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T196979 [Download][View] Facility Assigned ID: FA0AAD5BC10FM1
Submitter: Koni Sequencing Facility: INRA
Funding Organization: Funding for 5' and 3' resequencing of TOM1 microarray clones was provided by INRA. Sequencing was performed by Genoscope, Evry cedex, France. \ \ \
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: No vector sequence detected
Passed all screens and filters
Sequence Entropy: 0.974 Expected Error Rate: 0.0141 Quality Trim Threshold: 20.5