EST details — SGN-E395665

Search information 
Request: 395665Match: SGN-E395665
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C173932Clone name: TUS-17-G18
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: SGN-C173932 is on microarray TOM1 spot ID 1-1-7.3.17.7 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C6417 [cLEC-35-F7] Trace: SGN-T30856 EST: SGN-E210508 Direction: 5' Facility: TIGR
Clone: SGN-C173932 [TUS-17-G18] Trace: SGN-T196990 EST: SGN-E395664 Direction: 3' Facility: INRA
[Show information hierarchy]
Sequence 
Sequence Id: SGN-E395665Length: 692 bp (867 bp untrimmed)
Status: Current VersionDirection: 5' [See links to 3' reads above]
>SGN-E395665 [] (trimmed) GATCAACAAATTGGACAATATAGTTTCATCAAAGGGATCAGAGATAGATGTGTGGCCATTTTTGCAAACTTTGACAAGTGATGCAATTTCAAGAA
CAGCATTTGGTAGTAATTATGAAGAAGGAAGGCAAATATTTGAGCTACAAAAAGAACAAGCTGATTTAATTATACAAGCAGCAAGGTGGATATAC
ATCCCTGGATGGAGGTTTGTGCCAACAAAAAGGAACAAGAGGATAAAGCAAATAGCAAATGAAGTAAGATCATTAGTGTTGGGAATTATCAACAA
TAGAATAAAGGAAATGAAAGAAGGTGAAGCTACAAAAGATGATTTATTAGGTATATTATTGGAATCAAATTTCAAAGAAATACAAATTCATCATG
AAAACAAGAATTTTGGAATGACAATTGATGAAGTGATTGAAGAATGCAAATTATTTTATTTTGCTGGTCAAGAAACTACTTCAGTATTACTTGTT
TGGACTTTGATTTTATTGAGTAAACATTTGGATTGGCAAGAAAAAGCTAGACAAGAAGTTCATCAAGTATTTGGAAGTAACAAGCCTAACTATGA
CATGTTGAATCAATTGAAAGTTGTAACAATGATATTCAATGAGGTTCTAAGGTTATATCCACCAGGAACTATGATTGGTAGAAGAGTACAAAAAG
AGACAAAATTACGGCACTTGTCATTGC
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E395665] SGN-U580908 Tomato 200607 Build 2 8 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T196991 [Download][View] Facility Assigned ID: FA0AAD5BD09RM1
Submitter: Koni Sequencing Facility: INRA
Funding Organization: Funding for 5' and 3' resequencing of TOM1 microarray clones was provided by INRA. Sequencing was performed by Genoscope, Evry cedex, France. \ \ \
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.914 Expected Error Rate: 0.0017 Quality Trim Threshold: 14.5