EST details — SGN-E396151

Search information 
Request: 396151Match: SGN-E396151
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C183237Clone name: TUS-41-K11
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: SGN-C183237 is on microarray TOM1 spot ID 1-1-6.3.3.10 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C75023 [cLES-12-I20] Trace: SGN-T100014 EST: SGN-E286483 Direction: 5' Facility: TIGR
Clone: SGN-C183237 [TUS-41-K11] Trace: SGN-T191712 EST: SGN-E390386 Direction: 3' Facility: INRA
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Sequence 
Sequence Id: SGN-E396151Length: 536 bp (898 bp untrimmed)
Status: Current VersionDirection: 5' [See links to 3' reads above]
>SGN-E396151 [] (trimmed) CGCCAACCCCAAGATACACTATGAAACAACGGGTCCAGAGATCTGGGAAGACACAAAAGGCAAGATTGACATACTTGTTGCTGGCATTGGAACTG
GCGGAACCATTACAGGAACAGGCCGATTCCTTAAAGAGCAAAATCCAAACATTAAGATTATTGGTGTGGAGCCCACAGAAAGTAACGTTCTATCT
GGGGGCAAACCTGGCCCTCACAAAATTCAAGGGATTGGAGCAGGTTTTATTCCAGGAAACTTGGATCAAGATGTAATGGATGAAGTGATAGAGAT
ATCGAGTGACGAAGCTGTTGAAACTGCGAAGCAATTAGCCCTACAAGAAGGGTTGTTGGTTGGGATTTCTTCCGGAGCAGCTGCTCTTGCTGCCA
TTCAAGTTGGAAAGAGACCTGAGAATGCAGGAAAGCTTATTGGGGTTGTATTTCCAAGCTATGGGGAACGATACCTCTCCTCTATTCTTTTCCAG
TCAATAAGAGAGGAATGCGAGAACATGAAGCCAGATTTGTGAAGATCTTCTGATTCTTAAT
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E396151] SGN-U565168 Tomato 200607 Build 2 21 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T197477 [Download][View] Facility Assigned ID: FA0AAD29AF06RM1
Submitter: Koni Sequencing Facility: INRA
Funding Organization: Funding for 5' and 3' resequencing of TOM1 microarray clones was provided by INRA. Sequencing was performed by Genoscope, Evry cedex, France. \ \ \
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.968 Expected Error Rate: 0.0051 Quality Trim Threshold: 14.5