EST details — SGN-E396185

Search information 
Request: 396185Match: SGN-E396185
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C183233Clone name: TUS-41-K7
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: SGN-C183233 is on microarray TOM1 spot ID 1-1-2.3.3.6 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C78820 [cLES-6-N3] Trace: SGN-T98634 EST: SGN-E287182 Direction: 5' Facility: TIGR
Clone: SGN-C183233 [TUS-41-K7] Trace: SGN-T191503 EST: SGN-E390177 Direction: 5' Facility: INRA
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Sequence 
Sequence Id: SGN-E396185Length: 708 bp (898 bp untrimmed)
Status: Current VersionDirection: 3' [See links to 5' reads above]
>SGN-E396185 [] (trimmed) AGACAATAATATCATTATCTTTTTAATTGGTTAAAAAAAACAATGCATAATAATTTACAATAATTTGGGCCTTCTACTTTCAACAACACAAATCT
AAACTCAAAAATTCACATCACCAAACTTTCTTTGGAGTCATAAGCCCAAGAACTTCATCCCAAAGCCCAACACTTCCCACATCAAAAAGCCCAAT
TACACTTGGGCTACAAGCAGCTACAGTCCAATAACCAGCTCTAATCTCATCCTTCAATTGATCTTTTTCCCATGCACAATACCCATCAAAAAACC
TAAAATTATCAACCCCAACAACATCCCTTTTCACCATTTCAGAAGCACATCCCACACTTTCTTTTGTACCATAGTACAAACCTCTCATTACTTCA
TCAAAAACACCACTTTTTCCAAGCCCATCTTCATTTGGGCTTACTAAGAAAAGCCCATCTTCTAAAGGCCCACCAAAAAACAATGGCCTATTAGC
AAATGTCCCCGACATGTCAAGTACCGACGGTTTCATTTCCTTAATGGACATGAGTGAAGGCCTGTTTAAAATTAAGCCCATTGGGCCTATTGGGC
CCATTGACAACAACAGAACTACAGTCCGTTCAAATATGTGAACGCCATCCAGCTTTTCGGTAGCGATGAGTATACAACCTTTTTCCGGTTCGTGA
ATGGTGTGGGCCCATTTCGTGCCGATTGTGACGGCCGGAGGCG
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E396185] SGN-U565541 Tomato 200607 Build 2 16 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T197511 [Download][View] Facility Assigned ID: FA0AAD29AF04FM1
Submitter: Koni Sequencing Facility: INRA
Funding Organization: Funding for 5' and 3' resequencing of TOM1 microarray clones was provided by INRA. Sequencing was performed by Genoscope, Evry cedex, France. \ \ \
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 3' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.947 Expected Error Rate: 0.0014 Quality Trim Threshold: 14.5