EST details — SGN-E396270

Search information 
Request: 396270Match: SGN-E396270
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C184379Clone name: TUS-44-K1
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: SGN-C184379 is on microarray TOM1 spot ID 1-1-8.3.16.3 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C15496 [cLED-13-B22] Trace: SGN-T51898 EST: SGN-E236620 Direction: 5' Facility: TIGR
Clone: SGN-C184379 [TUS-44-K1] Trace: SGN-T192129 EST: SGN-E390803 Direction: 3' Facility: INRA
[Show information hierarchy]
Sequence 
Sequence Id: SGN-E396270Length: 718 bp (854 bp untrimmed)
Status: Current VersionDirection: 5' [See links to 3' reads above]
>SGN-E396270 [] (trimmed) CTCACTTCGGCGGCAAACGCAGTGCAGAGGAAAAGAGTGCCTTGCCGAAATGGTGACGTACAAGTTCCATCAGTATCAGGTTGTCGGGAGAGCTT
TGCCCACCGAAACAGATGAACATCCCAAGATTTATCGTATGAAGTTGTGGGCTACAAATGAAGTTCGTGCGAAGTCCAAATTCTGGTATTTCTTG
AGGAAGCTTAAGAAGGTGAAGAAGAGCAACGGTCAGATGCTGGCTATTAATGAGATCTTCGAGAAGAACCCAACAACAATTAAGAATTATGGTAT
TTGGCTCCGTTACCAGAGTAGAACGGGATACCACAACATGTACAAGGAGTACCGTGACACCACATTGAATGGTGGTGTGGAGCAGATGTACATTG
AGATGGCTTCTCGCCACAGAGTTCGCCATCACTGCATCCAGATCATAAAGACCGCAACCATTCCGGCTAAGCTGTGCAAGAGGGAGAGCACAAAG
CAGTTCCATGACTCCAAGATCAAGTTCCCCTTGGTGTTCAAGAAAGTCAGGCCACCATCTAGGATACTCAAGACCACATACAAGGCTACTAAGCC
CAACTTGTTCATGTAACTTGTTTGGTCATATGTGCATTGAGAAGCAACTTCAGATTTATGCAATTTTGGTGCAGTAGTTGAGTTGAGTTAAAGAT
TCATTGTGAAAGAGATATAAGTTAAACCTTTTTTGTTCGACTGACCAAATGAT
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E396270] SGN-U578490 Tomato 200607 Build 2 32 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T197596 [Download][View] Facility Assigned ID: FA0AAD32AF01RM1
Submitter: Koni Sequencing Facility: INRA
Funding Organization: Funding for 5' and 3' resequencing of TOM1 microarray clones was provided by INRA. Sequencing was performed by Genoscope, Evry cedex, France. \ \ \
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.981 Expected Error Rate: 0.0054 Quality Trim Threshold: 14.5