EST details — SGN-E396660
Search information |
Request: 396660 | Match: SGN-E396660 |
Request From: SGN database generated link | Match Type: EST sequence internal identifier |
Clone information |
SGN ID: SGN-C184116 | Clone name: TUS-43-P2 |
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Library Name: TUS | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:
Microarray: SGN-C184116 is on microarray TOM1 spot ID 1-1-7.4.19.19 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing |
No additional reads found.[Show information hierarchy]
Sequence |
Sequence Id: SGN-E396660 | Length: 532 bp (862 bp untrimmed) |
Status: Current Version | Direction: 5' |
>SGN-E396660 [] (trimmed)
ATGGGAAGCAAGTATTCTAAGGCAACAAATTCCATAAATGATGCTTTAAGCTCGAGTTATCTCGTTCCTTTTGAAAGTTATCGAGTTCCTTTAGT
AGATTTGGAGGAAGCAACTAATAATTTTGATCACAAGTTTTTAATTGGACATGGTGTCTTTGGGAAGGTTTACCAGGGTGTTTTGCGTGATGGAG
CAAAGGTGGCCCTGAAAAGGCGTACACCTGAGTCCTCACAAGGTATTGAAGAGTTCGAAACAGAAATTGAGACTCTCTCATTTTGCAGACATCCG
CATCTGGTTTCATTGATAGGATTCTGTGATGAAAGAAATGAGATGATTCTAATTTATAAATACATGGACAATGGGAACCTCAAGAGACATTTGTA
TGGATCAGATCTACCCACAATGAGCATGAGCTGGGAGCAGAGGCTGGAGATATGCATAGGGGCAGCCACAGGTCTACACTACCTTCATACTACAC
CAATTATACATCGTGATGTCAAGTCTACAAACATATTGCTTGATGAGAATTTTGTGC
AGATTTGGAGGAAGCAACTAATAATTTTGATCACAAGTTTTTAATTGGACATGGTGTCTTTGGGAAGGTTTACCAGGGTGTTTTGCGTGATGGAG
CAAAGGTGGCCCTGAAAAGGCGTACACCTGAGTCCTCACAAGGTATTGAAGAGTTCGAAACAGAAATTGAGACTCTCTCATTTTGCAGACATCCG
CATCTGGTTTCATTGATAGGATTCTGTGATGAAAGAAATGAGATGATTCTAATTTATAAATACATGGACAATGGGAACCTCAAGAGACATTTGTA
TGGATCAGATCTACCCACAATGAGCATGAGCTGGGAGCAGAGGCTGGAGATATGCATAGGGGCAGCCACAGGTCTACACTACCTTCATACTACAC
CAATTATACATCGTGATGTCAAGTCTACAAACATATTGCTTGATGAGAATTTTGTGC
Unigenes |
Current Unigene builds | |||||
[SGN-E396660] | SGN-U577094 | Tomato 200607 | Build 2 | 34 ESTs assembled | |
Follow SGN-U# link for detailed information and annotations |
Chromatogram |
SGN-ID: SGN-T197986 [Download][View] | Facility Assigned ID: FA0AAD31DH01RM1 |
Submitter: Koni | Sequencing Facility: INRA |
Quality processing |
Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
Sequence Entropy: 0.969 | Expected Error Rate: 0.0119 | Quality Trim Threshold: 14.5 |