EST details — SGN-E396793

Search information 
Request: 396793Match: SGN-E396793
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C183992Clone name: TUS-43-J22
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: SGN-C183992 is on microarray TOM1 spot ID 1-1-3.2.18.5 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
No additional reads found.
[Show information hierarchy]
Sequence 
Sequence Id: SGN-E396793Length: 663 bp (854 bp untrimmed)
Status: Current VersionDirection: 3'
>SGN-E396793 [] (trimmed) AGCATCATATATCACCATTCATTCTTTTATTTCATACATTAATAAACTACAACATTGAATAGAAATAACCAACTTCCTTATGCTGTGGAAATACT
TTGAGGCTCCCCAGTACAAAGTAAAGATCCATCATTATCATAGAGTTTGCAACCCTCTCCTGCACTACAACAATTAACACAAACTTGATTAAGTT
TTGCCAATCCAGAAGATGGACAAGTCATATAAGCAACTCTAGGGTCACATTCTTTAGTACAACCCTTAGGTTCAATACTCTCTCCTTCACACACA
AACTCTCCATCTTGACCAAAATAGTAGCAACCCTTGTAACCAGTGCAACACGTCGTACATCCTGTGGGATAGATTATCGTCTTTCCTTCTGAACG
TGGACACTTTGAATAGGCAATTTGTGGATCACAATATGAGGGGCAAATGTTAGGATTTTTTGGATCAGACGTTCCTTCACAAATAAAAGTTCCAT
TAGCGTTATAATAGTTGCAACCCTTATAGCCAGAGCAACAATTGGTACATATTGGATTTTCTGGACTTCCTTCTGAACCTGGGCATATCCCATAG
CCAAGATTACCACATTCTTTAGTACAAGCATTAGCGTGTTCCACCGTGCTTACTAGTAGATACATTCCAAGAACAAGTAAGTGAGCAAGGAAA
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E396793] SGN-U578841 Tomato 200607 Build 2 17 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T198119 [Download][View] Facility Assigned ID: FA0AAD31DE11FM1
Submitter: Koni Sequencing Facility: INRA
Funding Organization: Funding for 5' and 3' resequencing of TOM1 microarray clones was provided by INRA. Sequencing was performed by Genoscope, Evry cedex, France. \ \ \
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 3' sequence read -- flanking 5' vector arm detected.
Passed all screens and filters
Sequence Entropy: 0.957 Expected Error Rate: 0.0060 Quality Trim Threshold: 12.5