EST details — SGN-E397067

Search information 
Request: 397067Match: SGN-E397067
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C184312Clone name: TUS-44-H6
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: SGN-C184312 is on microarray TOM1 spot ID 1-1-3.4.16.2 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C79391 [cLES-8-M5] Trace: SGN-T99138 EST: SGN-E288618 Direction: 5' Facility: TIGR
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Sequence 
Sequence Id: SGN-E397067Length: 380 bp (865 bp untrimmed)
Status: Current VersionDirection: 5'
>SGN-E397067 [] (trimmed) GAGAATGTCTCTGTCTGTACTATGATAAGCTCTACGAGTTGCATTCACAGTATCCGTCCAAACGTCATGCTCTTTCAAAATATTGTTAAACAAAT
GTGTCTGCAAGTAGTTTGCTACCTCATGGCCCATATGTCCATCATATATTGCGAATAGTCCCAAATCGTTGTTATGGACTTGCTTAAACTCACAA
ACTAAACAGTCTTCCATCGCGTGATTAGACTTTCCCTTCACCAGGTGGGAACCATGAGTGATCCACTTTGATGCTCCGCCCTTGCCTCTTGTATC
TGGTGAGTCTGGCAGTGGAAGCCATAAAACATGCCTTTTCCTTCGTCTTGTGCACGATTTCTCTTCCTCCGCTCATGATTTTGAGATACTTTTAC
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E397067] SGN-U567601 Tomato 200607 Build 2 20 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T198393 [Download][View] Facility Assigned ID: FA0AAD32DD03RM1
Submitter: Koni Sequencing Facility: INRA
Funding Organization: Funding for 5' and 3' resequencing of TOM1 microarray clones was provided by INRA. Sequencing was performed by Genoscope, Evry cedex, France. \ \ \
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read -- flanking 3' vector arm detected.
Passed all screens and filters
Sequence Entropy: 0.962 Expected Error Rate: 0.0200 Quality Trim Threshold: 12.5