EST details — SGN-E397199

Search information 
Request: 397199Match: SGN-E397199
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C184468Clone name: TUS-44-N18
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: SGN-C184468 is on microarray TOM1 spot ID 1-1-7.2.16.12 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C82179 [cLET-1-C22] Trace: SGN-T102612 EST: SGN-E292338 Direction: 5' Facility: TIGR
[Show information hierarchy]
Sequence 
Sequence Id: SGN-E397199Length: 519 bp (861 bp untrimmed)
Status: Current VersionDirection: 5'
>SGN-E397199 [] (trimmed) CAAAGGCTGAAAAAACAGTAAAATTACAAACGCACTAAAAGATACTTGAACGGTTTTTTTTTTTACTTTAAAAAACATACCCAATAAAGGAAAGA
AATGGCCTTATTTTCTAGCAGTTTCAGCAAAATGGAAAGGGGAAGGTTTAAACAAGAACTTTCTGCTTCTTCAAAAGCCCTATTCCCGACGATGA
TGTATTAATCGAAGGACAAAAAGTTCAAGGCTCCACAGTCATGTTCTCTGCTTCTCGTCTGACAGTTTCGAAAAGCACAAAGGAAAGATATCCCT
CCCCGAAGCTTGGGAAAACAACAACAATGAGCTTCCCAGCATTTTCAGGACCCTTACCAACTTTAATTGCCCCAGCACCAGCCCCACCAGATGAT
ATTCCCACTACCAATCCTTCCTTCAATGCCAGAAGCTTAACCATTTCTATGGGATTCATCCCTTGAAACCTGAACTACATCTTCAACAAGGTTAA
CTTCCAAAAACACCAGGAAAAAAAACCACCACCCAATCCCCTGA
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E397199] SGN-U585413 Tomato 200607 Build 2 74 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T198525 [Download][View] Facility Assigned ID: FA0AAD32DG09RM1
Submitter: Koni Sequencing Facility: INRA
Funding Organization: Funding for 5' and 3' resequencing of TOM1 microarray clones was provided by INRA. Sequencing was performed by Genoscope, Evry cedex, France. \ \ \
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.933 Expected Error Rate: 0.0287 Quality Trim Threshold: 14.5