EST details — SGN-E397464
| Search information |
| Request: 397464 | Match: SGN-E397464 |
| Request From: SGN database generated link | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C184614 | Clone name: TUS-45-D20 |
| ||
| Library Name: TUS | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:
Microarray: SGN-C184614 is on microarray TOM1 spot ID 1-1-5.4.14.15 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C143461 [cTOF-23-D5] | Trace: SGN-T158713 | EST: SGN-E346436 | Direction: 5' | Facility: TIGR |
| Clone: SGN-C184614 [TUS-45-D20] | Trace: SGN-T200059 | EST: SGN-E398733 | Direction: 3' | Facility: INRA |
| Sequence |
| Sequence Id: SGN-E397464 | Length: 190 bp (849 bp untrimmed) |
| Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E397464 [] (trimmed)
GCCGTTTCATTTGGCTGCAAGAGGTGGTTCTCTTGATTGCATCCGTGAATTGTTGGCGTGGGGAGCAGATCGATTACATAGAGATTCCACCAGGA
GAGTACCATACACGGTTGCTTTAAGGTACCACCATGGTGCTTGTGCAGCTTTGTTGAATCCTTCATCGGGAGAGCCTCTCGTGTGGTCATCACCG
GAGTACCATACACGGTTGCTTTAAGGTACCACCATGGTGCTTGTGCAGCTTTGTTGAATCCTTCATCGGGAGAGCCTCTCGTGTGGTCATCACCG
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E397464] | SGN-U579194 | Tomato 200607 | Build 2 | 27 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T198790 [Download][View] | Facility Assigned ID: FA0AAD33DB10RM1 |
| Submitter: Koni | Sequencing Facility: INRA |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.962 | Expected Error Rate: 0.0235 | Quality Trim Threshold: 14.5 |
Working
