EST details — SGN-E397532

Search information 
Request: 397532Match: SGN-E397532
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C184846Clone name: TUS-45-N12
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: SGN-C184846 is on microarray TOM1 spot ID 1-1-5.2.14.14 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C184846 [TUS-45-N12] Trace: SGN-T200070 EST: SGN-E398744 Direction: 3' Facility: INRA
[Show information hierarchy]
Sequence 
Sequence Id: SGN-E397532Length: 606 bp (852 bp untrimmed)
Status: Current VersionDirection: 5' [See links to 3' reads above]
>SGN-E397532 [] (trimmed) GAGACTCAAAAAATGTTGGACTTTGCGGCAAAGCATAACATATCACCAGATATTGAAGTGGTGCCAATGGAGTACGTTAACACCGCGTTGGAACG
TCTTTTGAAATCAGACGTGAAATATAGATTTGTGCTACACATTGGTAATACATTGAACAAGAAATGAAAATATGGAGGGGATCAATTATGTAGCT
AGCAGTGTTTCCTCCATCATCTATTTATACTGCAGTAACTGATATTTAGTGAATACCTTACAGAATAACAACCCTTTGCCTTTACTCTATTAACT
AAATGAAATCCGTATATCTCTGATACATCTTTTCACATGAAAATCATACAACAAAGTCAAATTCTGAACTTAGTACTCAAGAAGACAGCTTGCAC
TAATGAATTATGACGGAACACCAAGATATGATGCAAGTTGCAAGATGACACTGTACTTTTTCCTCAAAAAAATGACACAGAGTACTCCACAAGCT
GTCACTTAGATTTTAAAAAATACATCTATTTCTTTTCTTTCCAACTTGTTTATCTCATACAATGTTGTTTTGCAAGTAAAATGATGAACATCAGT
TTCTGATGGATAGCATAAGAGAGTAAGTTCTTTTGA
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E397532] SGN-U572059 Tomato 200607 Build 2 13 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T198858 [Download][View] Facility Assigned ID: FA0AAD33DG06RM1
Submitter: Koni Sequencing Facility: INRA
Funding Organization: Funding for 5' and 3' resequencing of TOM1 microarray clones was provided by INRA. Sequencing was performed by Genoscope, Evry cedex, France. \ \ \
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read -- flanking 3' vector arm detected.
Passed all screens and filters
Sequence Entropy: 0.949 Expected Error Rate: 0.0098 Quality Trim Threshold: 12.5