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EST details — SGN-E398206

Search information 
Request: 398206Match: SGN-E398206
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C172878Clone name: TUS-14-K20
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: SGN-C172878 is on microarray TOM1 spot ID 1-1-5.3.20.11 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C14201 [cLEC-7-C9] Trace: SGN-T25369 EST: SGN-E202087 Direction: 5' Facility: TIGR
Clone: SGN-C172878 [TUS-14-K20] Trace: SGN-T195399 EST: SGN-E394073 Direction: 3' Facility: INRA
Clone: SGN-C172878 [TUS-14-K20] Trace: SGN-T195399 EST: SGN-E399085 Direction: 3' Facility: INRA
Clone: SGN-C172878 [TUS-14-K20] Trace: SGN-T195694 EST: SGN-E394368 Direction: 5' Facility: INRA
Clone: SGN-C172878 [TUS-14-K20] Trace: SGN-T200219 EST: SGN-E399086 Direction: 5' Facility: INRA
[Show information hierarchy]
Sequence 
Sequence Id: SGN-E398206Length: 648 bp (850 bp untrimmed)
Status: Current VersionDirection: 3' [See links to 5' reads above]
>SGN-E398206 [] (trimmed) AATTCAACTTTTGAAGTAGAGGCTACCCACTTATAATATAATATGATATGATATATATATGATTACACATGAACAAGAAAAATGGACTATGTTAC
ACTGAGAACTAACATCATATTCAAAGTTATGTAGCTACTATCATCATATATCTATATGTTTACATTAATATAATATGTATAAACTGACAAAACTG
GCATATTCTGCATAGATCACAACACCTTCACCACTTACAGCTCCTCCCCAAAAGAAAAAGAAGAAAACAATCTTGGCTGTTTTCTCCTTGACTTT
CTCCTTTGACGTACGATTACCTTGCATGGAGAAGCACTCGAAGCACACTCTTCATCTTTGGCCGGCCTTCTGGTGATACACTGACACAAGCTAGA
GCCAATTTGAGGACTGCTAACATCTGGCTCCTAACGTTGAGCGATGCCTTAGAAATGCTAGAATCCAGAATGTGATCCCACTTGCTGTGCTTCTC
AGAGTTGCTCAGCACTGACTTGGCTAACTCGGTTCCCTGACTAACTGCAGGCCTTCCTGTCAACAATTCCAGCAAAACGACCCCAAAGCTATATA
CATTTCCAGCCATTGTGACTCTCATTGTGTATGCATATTCTGGAGGAATATAACCGACAGACCCAGCAACACCAAAAA
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E398206] SGN-U573289 Tomato 200607 Build 2 18 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T199532 [Download][View] Facility Assigned ID: FA0AAD2BF10FM2
Submitter: Koni Sequencing Facility: INRA
Funding Organization: Funding for 5' and 3' resequencing of TOM1 microarray clones was provided by INRA. Sequencing was performed by Genoscope, Evry cedex, France. \ \ \
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 3' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.965 Expected Error Rate: 0.0018 Quality Trim Threshold: 14.5