EST details — SGN-E398601

Search information 
Request: 398601Match: SGN-E398601
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C184074Clone name: TUS-43-N8
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: SGN-C184074 is on microarray TOM1 spot ID 1-1-1.2.19.19 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C23106 [cLED-4-I12] Trace: SGN-T49445 EST: SGN-E231676 Direction: 5' Facility: TIGR
Clone: SGN-C184074 [TUS-43-N8] Trace: SGN-T198128 EST: SGN-E396802 Direction: 3' Facility: INRA
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Sequence 
Sequence Id: SGN-E398601Length: 528 bp (881 bp untrimmed)
Status: Current VersionDirection: 5' [See links to 3' reads above]
>SGN-E398601 [] (trimmed) AGATCACTACCTTTCTCCTAATTTTTGCATCTTCTTAGTTCTCTCTGTTCTGAAAATTTTTCTTTAGAAAAAACACACACAAAAAAAAATAAAAA
TGGGAAGAGCACCATGTTGTGCTAAAGAAGGATTGCGTAAAGGGCCATGGTCTACTAAAGAAGATTTATTACTTACTAATTATATCAATCAATAT
GGTGAAGGCCAATGGAGATCTTTGCCTAAAAATGCTGGATTGCTTAGGTGTGGGAAAAGTTGTAGATTAAGATGGGTGAATTATTTAAAGCCAGG
GATTAAAAGAGGAAATTTTAGTGAAGATGAAGAAGATCTTATAGTGAGATTACATTCACTTCTGGGTAATCGTTGGTCATTAATTGCCGGACGAT
TACCTGGTCGAACAGATAATGAAATCAAGAATTATTGGAATACGCATTTGACCAAGAAGCTCAGAAGCACAGGAATTGAACCAAAACCCCACAAG
AATTTGACCAAATTAAAGGAGAAATCAAGAGAACAAACCAAAAAGGGAGAAAT
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E398601] SGN-U574376 Tomato 200607 Build 2 10 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T199927 [Download][View] Facility Assigned ID: FA0AAD31DG04RM1
Submitter: Koni Sequencing Facility: INRA
Funding Organization: Funding for 5' and 3' resequencing of TOM1 microarray clones was provided by INRA. Sequencing was performed by Genoscope, Evry cedex, France. \ \ \
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.940 Expected Error Rate: 0.0023 Quality Trim Threshold: 14.5