EST details — SGN-E398790

Search information 
Request: 398790Match: SGN-E398790
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C183186Clone name: TUS-41-I8
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: SGN-C183186 is on microarray TOM1 spot ID 1-1-1.1.3.6 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C72095 [cLER-1-C2] Trace: SGN-T92090 EST: SGN-E280536 Direction: 5' Facility: TIGR
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Sequence 
Sequence Id: SGN-E398790Length: 239 bp (859 bp untrimmed)
Status: Current VersionDirection: 5'
>SGN-E398790 [] (trimmed) CAAATTTTCAGCGAGGGTGGACATGACTACATGGGAAACCCAAGCTTGGTCCATGCAAAAGCATTTTGGCTATCTGGGCTTGCCAAGTTGTGTTG
ATGGGAGCCGTTGAAGGTTACCGTAATGCTGGTGGGCCTCGTGGTGAGGTTGATTACCCACGCTAACCGGTTGGTGGCATTGACCCGATGGGGCT
TGCTAATTAGGACCATGCTCTGCCCGAACTCCTTGTAAAATAAATCGAG
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E398790] SGN-U579181 Tomato 200607 Build 2 140 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T200116 [Download][View] Facility Assigned ID: FA0AAD29BE04RM1
Submitter: Koni Sequencing Facility: INRA
Funding Organization: Funding for 5' and 3' resequencing of TOM1 microarray clones was provided by INRA. Sequencing was performed by Genoscope, Evry cedex, France. \ \ \
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read -- flanking 3' vector arm detected.
Passed all screens and filters
Sequence Entropy: 0.970 Expected Error Rate: 0.0404 Quality Trim Threshold: 12.5