EST details — SGN-E400244
Search information |
Request: 400244 | Match: SGN-E400244 |
Request From: SGN database generated link | Match Type: EST sequence internal identifier |
Clone information |
SGN ID: SGN-C205943 | Clone name: cSTC-6-A1 |
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Library Name: cSTC | Organism: Solanum tuberosum |
Tissue: sprouting eyes from tubers
Development Stage: 12-14 weeks post harvest
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing |
No additional reads found.[Show information hierarchy]
Sequence |
Sequence Id: SGN-E400244 | Length: 435 bp (768 bp untrimmed) |
Status: Current Version | Direction: 5' |
>SGN-E400244 [] (trimmed)
AAAAAAAGAAGCTCAATTGCATAGAGAGTACCCTTTTTTTTTTTGTGTAAATTTTAAAGTGCAATAATTTTGAGAATTCATCAATGGCAACTTTA
AGCAGATTCTTAAAGAAAAGATCATTAGCTAGCAACCAGATTGTTCTCTACACAACTTCCTCATACCTAACATCAAGTCTGAAGTTTCTCAATTA
ATTGGGAAAACACCCAATGGTTTATCTTAAAAAAGTGACCAGAAGGATGTGGAGCATATATAGCTGTGAAACAAGAGAAGTTTCAGCCTACTTCT
AGCATCAAAGACAGGTACAAAAACTGTGTTCTTATGTGTATTTGCTTCCAGTTCTATGCTTTAAAGAATCAAAATTATCTTGTTTGTTTTGCACC
AGACCAGCATTGGCAATGATCAATGATGCAGAAAAGAAAGGCTTAATATCACCTG
AGCAGATTCTTAAAGAAAAGATCATTAGCTAGCAACCAGATTGTTCTCTACACAACTTCCTCATACCTAACATCAAGTCTGAAGTTTCTCAATTA
ATTGGGAAAACACCCAATGGTTTATCTTAAAAAAGTGACCAGAAGGATGTGGAGCATATATAGCTGTGAAACAAGAGAAGTTTCAGCCTACTTCT
AGCATCAAAGACAGGTACAAAAACTGTGTTCTTATGTGTATTTGCTTCCAGTTCTATGCTTTAAAGAATCAAAATTATCTTGTTTGTTTTGCACC
AGACCAGCATTGGCAATGATCAATGATGCAGAAAAGAAAGGCTTAATATCACCTG
Unigenes |
Current Unigene builds | |||||
[SGN-E400244] | SGN-U270030 | Solanum tuberosum | Build 4 | 11 ESTs assembled | |
Follow SGN-U# link for detailed information and annotations |
Chromatogram |
SGN-ID: SGN-T201117 [Download] [View] | Facility Assigned ID: PSEAU01TH |
Submitter: Koni | Sequencing Facility: TIGR |
Quality processing |
Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
Sequence Entropy: 0.931 | Expected Error Rate: 0.0228 | Quality Trim Threshold: 14.5 |