EST details — SGN-E401387
Search information |
Request: 401387 | Match: SGN-E401387 |
Request From: SGN database generated link | Match Type: EST sequence internal identifier |
Clone information |
SGN ID: SGN-C265571 | Clone name: PPC-4-C11 |
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Library Name: PPC | Organism: Solanum tuberosum |
Tissue: leaf
Development Stage: 6 week old
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing |
No additional reads found.[Show information hierarchy]
Sequence |
Sequence Id: SGN-E401387 | Length: 477 bp (905 bp untrimmed) |
Status: Current Version | Direction: 5' |
>SGN-E401387 [] (trimmed)
TGGACGTGTTAGATGCATGCAGGTGTGGCCACCAATTAACATGAAGAAATACGAGACATTGTCATACCTTCCTGACTTGTCCGATGAGCAATTGC
TTAAGGAAGTTGAGTACCTTTTGAAAAATGGATGGGTTCCTTGCTTGGAATTCGAGACTGAGCACGGATTTGTGTACCGTGAGCACCACAAGTCA
CCAGGATACTATGATGGTAGATACTGGACCATGGGGAAGTTGCCTATGGTTGGGTGGACTGACGCCACCCAAGTGGTGGCTGAAGGTCCAGAAGG
CCAGAAAGGGGAACCCCCGGGCCGGAATCCGAATATTCGAATCCACAAAGGTCCGCCAGGGGAGGGGCTTCAGTTCCTTGGCCAACAAGCACAAA
GAGAACTAATTTTCTCCAAACCAATAATTAATAACCCCAAGGTTGGTTGGATTGGAACCAAGCCTTTTTTTAAAAAAAAATAACCCCAACTGTTT
TT
TTAAGGAAGTTGAGTACCTTTTGAAAAATGGATGGGTTCCTTGCTTGGAATTCGAGACTGAGCACGGATTTGTGTACCGTGAGCACCACAAGTCA
CCAGGATACTATGATGGTAGATACTGGACCATGGGGAAGTTGCCTATGGTTGGGTGGACTGACGCCACCCAAGTGGTGGCTGAAGGTCCAGAAGG
CCAGAAAGGGGAACCCCCGGGCCGGAATCCGAATATTCGAATCCACAAAGGTCCGCCAGGGGAGGGGCTTCAGTTCCTTGGCCAACAAGCACAAA
GAGAACTAATTTTCTCCAAACCAATAATTAATAACCCCAAGGTTGGTTGGATTGGAACCAAGCCTTTTTTTAAAAAAAAATAACCCCAACTGTTT
TT
Unigenes |
Current Unigene builds | |||||
[SGN-E401387] | SGN-U281209 | Solanum tuberosum | Build 4 | 108 ESTs assembled | |
Follow SGN-U# link for detailed information and annotations |
Chromatogram |
SGN-ID: SGN-T258958 [Download] [View] | Facility Assigned ID: PPCAM18TH |
Submitter: Koni | Sequencing Facility: TIGR |
Quality processing |
Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
Sequence Entropy: 0.973 | Expected Error Rate: 0.0329 | Quality Trim Threshold: 12.5 |