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EST details — SGN-E401880

Search information 
Request: 401880Match: SGN-E401880
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C266031Clone name: PPC-5-J21
nocartOrdering Not Available
Library Name: PPCOrganism: Solanum tuberosum

Tissue: leaf
Development Stage: 6 week old

There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
No additional reads found.
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Sequence 
Sequence Id: SGN-E401880Length: 619 bp (896 bp untrimmed)
Status: Current VersionDirection: 5'
>SGN-E401880 [] (trimmed) TAAAAACAACAATGGCGGCTGCAACAGTGAGGGTATCAGCAAACAACACTATAACAGCTTCACTCATATCGAAAGGTCCTCTCCAAAAGACCAGC
ATTTTCAACCTTTGCTTCCGTAATGGAGGTGCTTCTGCACAAAGGAGGCGACATTTCAGTTGCAGTGCTATTTACAATCCCCAGATTCAAATCAA
ACAACACGGACAGCCTGAAACGTTAGATTATCGTGTATTTTTTGCGGAAGATTCCGGCAAAAAGGTATCCCCTTGGCATGATATACCACTTCATT
TAGGTGACGGTGTTTTCAATTTCATTGCTGAAATTCCCAAAGAATCAAGTGCTAAGATGGAAGTTGCTACGGATGAGCAGTACACACCAATTAAA
CAAGACACAAAGAAGGGGAAACTTAGATACTATCCATATAATATTCACTGGAACTATGGATTGCTTCCTCAAACCTGGGAAGACCCTTCATTGGC
AAATGCTGAAGTTGAGGGGGCATTTGGAGATAATGACCCCGTTGATGTTGTCGAGATTGGGGAAAGCCGTGCTAAAATTGGCCAGGTCTTGAAGG
TCAAACCTTTAGCTGCTTTGGCAATGATTGATGAAGGAGAACTTGACTG
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E401880] SGN-U269703 Solanum tuberosum Build 4 5 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T259451 [Download] [View] Facility Assigned ID: PPCAS59TH
Submitter: Koni Sequencing Facility: TIGR
Funding Organization: National Science Foundation
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.973 Expected Error Rate: 0.0136 Quality Trim Threshold: 14.5