EST details — SGN-E401880
Search information |
Request: 401880 | Match: SGN-E401880 |
Request From: SGN database generated link | Match Type: EST sequence internal identifier |
Clone information |
SGN ID: SGN-C266031 | Clone name: PPC-5-J21 |
| ||
Library Name: PPC | Organism: Solanum tuberosum |
Tissue: leaf
Development Stage: 6 week old
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing |
No additional reads found.[Show information hierarchy]
Sequence |
Sequence Id: SGN-E401880 | Length: 619 bp (896 bp untrimmed) |
Status: Current Version | Direction: 5' |
>SGN-E401880 [] (trimmed)
TAAAAACAACAATGGCGGCTGCAACAGTGAGGGTATCAGCAAACAACACTATAACAGCTTCACTCATATCGAAAGGTCCTCTCCAAAAGACCAGC
ATTTTCAACCTTTGCTTCCGTAATGGAGGTGCTTCTGCACAAAGGAGGCGACATTTCAGTTGCAGTGCTATTTACAATCCCCAGATTCAAATCAA
ACAACACGGACAGCCTGAAACGTTAGATTATCGTGTATTTTTTGCGGAAGATTCCGGCAAAAAGGTATCCCCTTGGCATGATATACCACTTCATT
TAGGTGACGGTGTTTTCAATTTCATTGCTGAAATTCCCAAAGAATCAAGTGCTAAGATGGAAGTTGCTACGGATGAGCAGTACACACCAATTAAA
CAAGACACAAAGAAGGGGAAACTTAGATACTATCCATATAATATTCACTGGAACTATGGATTGCTTCCTCAAACCTGGGAAGACCCTTCATTGGC
AAATGCTGAAGTTGAGGGGGCATTTGGAGATAATGACCCCGTTGATGTTGTCGAGATTGGGGAAAGCCGTGCTAAAATTGGCCAGGTCTTGAAGG
TCAAACCTTTAGCTGCTTTGGCAATGATTGATGAAGGAGAACTTGACTG
ATTTTCAACCTTTGCTTCCGTAATGGAGGTGCTTCTGCACAAAGGAGGCGACATTTCAGTTGCAGTGCTATTTACAATCCCCAGATTCAAATCAA
ACAACACGGACAGCCTGAAACGTTAGATTATCGTGTATTTTTTGCGGAAGATTCCGGCAAAAAGGTATCCCCTTGGCATGATATACCACTTCATT
TAGGTGACGGTGTTTTCAATTTCATTGCTGAAATTCCCAAAGAATCAAGTGCTAAGATGGAAGTTGCTACGGATGAGCAGTACACACCAATTAAA
CAAGACACAAAGAAGGGGAAACTTAGATACTATCCATATAATATTCACTGGAACTATGGATTGCTTCCTCAAACCTGGGAAGACCCTTCATTGGC
AAATGCTGAAGTTGAGGGGGCATTTGGAGATAATGACCCCGTTGATGTTGTCGAGATTGGGGAAAGCCGTGCTAAAATTGGCCAGGTCTTGAAGG
TCAAACCTTTAGCTGCTTTGGCAATGATTGATGAAGGAGAACTTGACTG
Unigenes |
Current Unigene builds | |||||
[SGN-E401880] | SGN-U269703 | Solanum tuberosum | Build 4 | 5 ESTs assembled | |
Follow SGN-U# link for detailed information and annotations |
Chromatogram |
SGN-ID: SGN-T259451 [Download] [View] | Facility Assigned ID: PPCAS59TH |
Submitter: Koni | Sequencing Facility: TIGR |
Quality processing |
Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
Sequence Entropy: 0.973 | Expected Error Rate: 0.0136 | Quality Trim Threshold: 14.5 |