EST details — SGN-E405101
Search information |
Request: 405101 | Match: SGN-E405101 |
Request From: SGN database generated link | Match Type: EST sequence internal identifier |
Clone information |
SGN ID: SGN-C264351 | Clone name: PPC-16-F1 |
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Library Name: PPC | Organism: Solanum tuberosum |
Tissue: leaf
Development Stage: 6 week old
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing |
No additional reads found.[Show information hierarchy]
Sequence |
Sequence Id: SGN-E405101 | Length: 372 bp (916 bp untrimmed) |
Status: Current Version | Direction: 5' |
>SGN-E405101 [] (trimmed)
ATTGTATCTTTCGTAGTAAATCCAACAAACATTAATGGCTACTCCAAGTGTACAACAAATTCGTCCTGCATCTCTTGATTCTACTTCCGAACCGC
CAGCCCTGTTTGATGGAACTACAAAGTTGTATATCAGTTATACATGCCCTTTTGCACAGCGTGCGTGGATTACCAGAAATTTCAAGGGTTTGCAA
GATAAGATCGAATTAGTTCCAATTGATCTTCAGAACAAGCCTGTTTGGTACAAGGAAAAAGTGTACCCTCAAAATAAAGTGCCCTCTCTGGAACA
CAAAAACAAAGTGATTGGAGAAAGTCTTGATCTGGTTAAATATATCGACAGCAACTTTGAAGGTCCGTCTCTTCTACCTGATGACCC
CAGCCCTGTTTGATGGAACTACAAAGTTGTATATCAGTTATACATGCCCTTTTGCACAGCGTGCGTGGATTACCAGAAATTTCAAGGGTTTGCAA
GATAAGATCGAATTAGTTCCAATTGATCTTCAGAACAAGCCTGTTTGGTACAAGGAAAAAGTGTACCCTCAAAATAAAGTGCCCTCTCTGGAACA
CAAAAACAAAGTGATTGGAGAAAGTCTTGATCTGGTTAAATATATCGACAGCAACTTTGAAGGTCCGTCTCTTCTACCTGATGACCC
Unigenes |
Current Unigene builds | |||||
[SGN-E405101] | SGN-U271995 | Solanum tuberosum | Build 4 | 11 ESTs assembled | |
Follow SGN-U# link for detailed information and annotations |
Chromatogram |
SGN-ID: SGN-T262672 [Download] [View] | Facility Assigned ID: PPCCK25TH |
Submitter: Koni | Sequencing Facility: TIGR |
Quality processing |
Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
Sequence Entropy: 0.969 | Expected Error Rate: 0.0178 | Quality Trim Threshold: 14.5 |